Xenopus tropicalis (tropical clawed frog): 100493355
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Entry
100493355 CDS
T01011
Symbol
clstn2
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100493355 (clstn2)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Cadherin related
100493355 (clstn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
CDC45
FAM176
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
100493355
NCBI-ProteinID:
XP_002941239
Xenbase:
XB-GENE-958942
UniProt:
F7EF47
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Position
5:122659993..123098911
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AA seq
949 aa
AA seq
DB search
MTGMAIYWVTAACILGVGCSVLATKVNKHKPWIETSYHGVITENNDTVILDPPLVALDKD
APVPFAGEICAFKIHGQDTPFEAVVLNKTSGEGRLRAKGPIDCEIQKEYTFIIQAYDCGA
GQAGTSWKKSHKAVVHIQVNDVNEFAPVFKEKKYSAMVTEGKIYDSILQVEAMDEDCSPQ
YSQICNYEIVTSDVPFAIDRNGNIRNTEKLSYDKQHQYEIKVTAYDCGQKHATEDVTVIV
DIKPVCKPGWQDWDKRIEYNPGSGSIALLPTVRLETCDGPVSFIRTSIELQTNHIGKGCD
RETYSDASLKALCGASSGAIDLLPSPSASTNWTAGLIMDNSGMIFKFDGKQGVKIPDAIL
PKNLTDQFTITMWMKHGPSPGLRAEKETILCNSDKTEMNRHHYALYVHNCRLVFLLRRDF
DQADTFRPAEFHWKLDQICDKEWHYYIINIAFPLVTLYMDGATYEPYLVTNDWPIHPSHI
AMQLTVGACWQGGEVTKPKFAQYFHGSIAGLMLRPGKIESHKMISCLQACKEGLDIKSLE
NLGQGVKYHFNPSQSALVMEGEDIESINQALRTVSYINSRQFPTAGKRRLKVSSKVQCFG
EDTCITIPDIEAYIMVVQANEPKITVTGMDHFARPASEFENANGVILLPDIRITSTVTKM
EKRLSKNVGKTNAPVVVEETLHHLDFCDVMVSGEELDVKKECLELDRTALQGKHLEATNS
TKGYSIYGVGTMKSYEDVLQQIRYRHWDSASIFGRKFKVKCSELNGRYTSNELNLEVNIL
HNSNFMDHVNHMMIQQEFMPSLQHPSTELSKHETRVSPGATTIVLVACVSILVIIVVLGI
FRLRAVHQHDFQEKEAVKDDELTWDDSALTITVNPMEKYETHGTNEGESEVEEEEEEIEE
EDDDEEEDESTSGDSDESDEEDMETQAKAKQHNAARRGHLAWNHLTLTY
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgacagggatggcaatttactgggtgacagcagcttgcatcctgggtgttggctgcagt
gtgctcgccactaaagtgaacaaacacaaaccttggattgagacttcgtaccatggagtc
attactgaaaacaatgacactgtgattctagatccacctttggttgctctggataaagat
gccccggttccttttgcaggggaaatatgtgcattcaaaattcatggacaagatactcct
tttgaagctgtagtgctgaacaagacatctggagaagggcgtctcagagcaaaaggacca
attgattgtgaaattcagaaggagtacacctttattatccaggcttatgactgtggtgca
ggtcaagctggaacaagctggaaaaaatctcacaaagctgtagttcatatacaagtgaat
gacgtgaatgagtttgctccggtgtttaaagagaagaagtacagtgccatggtgacggag
gggaagatctatgatagcatcctacaggtggaagcaatggatgaggactgctccccccag
tacagtcagatctgcaattatgaaatagtaacaagtgatgtgccatttgctattgacaga
aacggaaacataaggaacacagagaaactgagctatgataagcaacaccagtatgaaatt
aaagtcactgcctatgactgcggacaaaagcatgccacggaggatgtcacagttatcgtg
gacattaagcctgtctgcaaacctgggtggcaagactgggataaacgcattgaatacaac
cctggttctgggagtattgccttgcttcctactgttaggctagaaacttgtgatgggcct
gtatccttcatccgaacgagtattgagcttcagacaaatcatattgggaaaggctgcgac
cgtgaaacttactctgatgcatcactgaaggcattatgtggagcctcttctggtgccatt
gacttactcccatcacccagtgcttcaactaactggacagctggtcttatcatggacaac
agtggtatgatctttaaatttgatggcaagcaaggagtaaagataccagatgcaattcta
ccgaagaatctaactgaccagttcacgatcacaatgtggatgaaacatggtccaagtcct
ggattaagagctgaaaaagagaccatcctgtgcaactctgataaaacagagatgaaccgt
caccactacgctctctatgtgcacaactgccgccttgtgttcctattgcgtcgagacttt
gaccaagcagacactttcagacctgcagagttccactggaaactggatcagatttgtgac
aaggaatggcactactacataatcaacatagctttcccacttgttaccttatacatggat
ggagcaacatatgagccatacctggtaaccaatgactggcccattcatccttcccacatt
gccatgcaactgacagttggagcttgttggcaaggtggggaagtcacaaagcctaaattt
gctcagtactttcatggaagcattgctggtcttatgctgcgtcctggcaaaattgaaagc
cataaaatgatttcctgcttacaggcctgcaaagaaggactggatatcaaatccctggag
aatctggggcaaggtgtaaagtatcacttcaacccttctcaatccgctcttgtaatggaa
ggtgaagacattgaaagtataaatcaagctctccgtacggtctcatacatcaactctcgc
cagttccccactgctggtaaaagaagactgaaggtgtcatccaaagtccaatgctttgga
gaagatacttgcatcacgataccggatatcgaagcgtatattatggttgtccaagcgaat
gaacctaagataacagtcactggaatggaccactttgcacgcccagcgtcagagtttgaa
aatgcaaatggtgttattttattgccagacattcgaataaccagcacagtgacaaagatg
gagaagagactgagtaagaatgttggcaaaactaatgccccagtagtggtggaagaaact
ctacatcacttggacttctgtgatgttatggtcagtggggaggagctggatgtgaaaaag
gagtgtttagagctggaccgcactgctctccaaggcaaacatctggaggctacaaattct
actaaggggtactcaatctatggtgtgggcacaatgaaaagctatgaggatgttcttcag
caaatacgctaccggcattgggactctgcatcaatctttggcaggaaatttaaagtcaag
tgctctgaattaaatgggcgttatacaagtaatgagcttaaccttgaggttaatatactg
cacaattcaaattttatggatcatgtaaatcatatgatgatacagcaagagtttatgcca
tcactgcaacatccaagcactgaattatccaagcatgaaacacgtgtttctccaggcgct
accaccattgtcttagtggcctgtgtcagtattctggttattattgtagttttgggcatc
ttcagattgcgggccgtgcaccagcatgacttccaagaaaaagaggctgtaaaagatgat
gaactaacttgggatgactcggctctgactatcacagtgaacccaatggagaaatatgaa
actcatggaacaaatgaaggtgagagtgaagtagaggaggaggaggaggaaattgaagaa
gaggatgatgatgaggaagaggatgagagtacaagtggtgactctgatgaaagtgatgaa
gaagatatggaaacccaagcaaaggcaaagcaacacaatgcagcacggagaggacacctg
gcatggaatcacctaacacttacatactaa
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