Xenopus tropicalis (tropical clawed frog): 100494529
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Entry
100494529 CDS
T01011
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00310
Lysine degradation
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100494529 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100494529 (prdm6)
03036 Chromosome and associated proteins [BR:
xtr03036
]
100494529 (prdm6)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
100494529 (prdm6)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100494529 (prdm6)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100494529 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
100494529
NCBI-ProteinID:
XP_002931772
Xenbase:
XB-GENE-854907
UniProt:
F6ZMU6
LinkDB
All DBs
Position
1:complement(169308581..169388647)
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AA seq
541 aa
AA seq
DB search
MLKPGEAGGSAFLKVDPVYLQHWQQLFPQSHVKTGVLSHVALPERAEPPMDPLRLRPASL
SSASSSNSSTPSSLAGVTPIPSVLGVLPSTEAVAPQRNELGISKCTEETLERLQCSPEEL
DYYLYGQQRMEIIPLSTPTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSTAAVAP
PPEIPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLVSPEKVQNGGVR
NTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYVRCARHCGEQNLTVVQYRSNIFYRACID
IPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSPVIEAMSRQDTLQSFNKNGKLSSS
LQRSLVFPQTPCNRNYSLLEKSGPLDTGYNQINVKNQRVLASPTSTSQLNSEFSDWHLWK
CGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYC
GRAFAGATTLNNHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPITESTESIEV
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaggctggtggatctgcgttcctgaaggttgacccggtgtatctc
cagcactggcagcagctctttccccagagtcatgtcaagactggagttctgagccatgtg
gcccttcctgagcgagcggagccccctatggaccctctccgcctgcgcccagcatccctc
tcctcagcctcttcctccaactcttccactccgtcctccctggccggggtcacccctata
ccctcagttctaggggttctacccagcactgaggccgtggccccccaaagaaatgagctg
ggaatttccaagtgcacagaggagacgcttgagagactccagtgctccccggaggaactg
gactactacttgtatgggcagcaacgcatggagatcatccccctcagcacccctaccagc
gaccccaacaaccgctgtgacatgtgtgcagataatcgtaatggagaatgtccaatgcac
ggtccactacattctctgcgtcgcctagtgggcaccagcagcactgcagcagtagctcct
ccacctgaaattcctgagtggttgcgggacctgccacgtgaagtgtgcctttgtaccagt
actgttccaggtctggcttacggcatttgtgcagctcagagaattcaacaaggaacttgg
attggacccttccagggagtccttgtgtctccagaaaaagtgcagaacgggggtgtacga
aacacacagcatctctgggaaatatatgaccaagatgggactctacagcattttattgat
ggaggagagcctagtaagtcaagctggatgaggtatgtccgatgcgctagacactgcggg
gaacagaatttgacagtagttcagtacagatctaatatattttatagagcttgtattgac
atccccagaggcacagaactgctggtgtggtacaatgacagctacacatcattctttggc
attccgttgcaatgcattgctcaggatgaaaacttgaatgttccatcaccagtaattgaa
gcaatgtcacggcaagacacattacaatctttcaacaaaaatggcaagttgagcagctca
ttacaaaggtccctagttttcccacagactccctgcaatagaaattactctttactggag
aaatctgggcctctggacacaggatataaccagatcaatgtaaaaaaccagagagtgctt
gccagccctacctcaacaagccagctaaattcagaattcagtgactggcatctgtggaaa
tgtggacaatgttttaagacttttacccaacgaattcttctacagatgcatgtgtgcacc
cagaacccagacaggccttaccagtgcggacattgctctcagtccttctctcagccttcc
gaattaaggaatcacgttgtcactcactccagcgatagacccttcaagtgtggctattgt
ggcagagcctttgctggggcaactacattaaacaatcacatccggacgcacacaggggaa
aagccatttaagtgcgagaggtgtgataggagcttcacacaggccacccagctgagtcga
catcagaggatgcccaacgaatgtaagccgataacagaaagcacagaatcaattgaagtg
gattaa
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integrated database retrieval system
