Xenopus tropicalis (tropical clawed frog): 447995
Help
Entry
447995 CDS
T01011
Symbol
hdac2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03082
ATP-dependent chromatin remodeling
xtr03083
Polycomb repressive complex
xtr04110
Cell cycle
xtr04330
Notch signaling pathway
xtr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
447995 (hdac2)
03083 Polycomb repressive complex
447995 (hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
447995 (hdac2)
04350 TGF-beta signaling pathway
447995 (hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
447995 (hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
447995 (hdac2)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
447995 (hdac2)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
447995 (hdac2)
HDAC complexes
Sin3A-HDAC complex
447995 (hdac2)
BRAF-HDAC complex
447995 (hdac2)
REST complex
447995 (hdac2)
SHIP complex
447995 (hdac2)
MiDAC complex
447995 (hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
447995 (hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
447995 (hdac2)
Chromatin remodeling factors
NuRD complex
447995 (hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
447995
NCBI-ProteinID:
NP_001005432
Xenbase:
XB-GENE-485807
UniProt:
Q6GLI1
LinkDB
All DBs
Position
5:75840027..75863800
Genome browser
AA seq
488 aa
AA seq
DB search
MAYTQGGAKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARLEEEKKETDDKKSDVKEEDKSKDNIAEKMDTKGV
KSEQPSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacactcaggggggtgccaagaagaaggtctgctactattatgatggggatatc
ggaaattactactatggccaagggcatccaatgaagcctcacagaatccgcatgacccat
aatttgctgctgaactatggcctttatagaaaaatggaaatttatcgacctcacaaggca
acagctgaagagatgaccaagtatcacagtgatgaatatattaaatttcttcgatcgata
cgaccagacaatatgtctgaatacagcaaacaaatgcagaggtttaacgtaggtgaagac
tgtcctgtgtttgatggcctctttgagttttgtcagctgtctactggtggttctgtagct
ggtgccgtaaaactcaaccggcaacaaacagatatggctgttaactgggcagggggcctt
catcatgctaagaaatcagaagcatctggattttgttatgtgaatgatattgttcttgca
atccttgaacttctgaagtatcaccaaagagtgttatatattgatattgatatccatcat
ggtgatggtgttgaagaggcattttataccaccgatcgtgtcatgacagtgtcatttcac
aaatatggcgaatacttccctggcactggagatcttagggatattggtgcaggaaaaggt
aaatattatgctgtcaattttccaatgagggatgggattgatgatgagtcttatggacaa
atctttaagccgataatttctaaagtaatggagatgtaccagcccagtgctgttgttctg
cagtgtggtgcagactctctttctggtgaccgtcttggatgcttcaatctgactgtaaaa
ggtcatgcaaagtgtgtagaagtggtgaaaacatttaatttgcctttgttgatgcttggg
ggaggtggatacacaatacgcaatgttgctcgatgctggacatatgagactgctgttgca
ctggactgtgaaatcccaaatgaattgccgtacaatgattactttgaatattttggacct
gacttcaagctacatattagcccttctaatatgacaaatcaaaatactcctgaatatatg
gaaaaaataaagcagcgcttgtttgaaaacttgcgtatgctgcctcatgctcctggagta
cagatgcaggctattccagaggatgctgtacaggaggacagtggtgatgaggaaggagaa
gacccagacaagcgcatttccatacgagcttctgacaagcgcatagcctgcgatgaggag
ttttcagattcagaggatgaaggtgaaggaggaagacgtaacgtagcagatcacaaaaag
ggagcaaaaaaagcaagacttgaagaagagaaaaaagaaacagatgacaagaaatctgat
gttaaagaagaggataaatccaaggacaacattgcagagaaaatggacacaaaaggtgtt
aagtctgaacaaccaagtaatccgtga
DBGET
integrated database retrieval system
