Xenopus tropicalis (tropical clawed frog): 493466
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Entry
493466 CDS
T01011
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
493466 (tmf1)
Membrane trafficking [BR:
xtr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
493466 (tmf1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
493466
NCBI-ProteinID:
NP_001008104
Xenbase:
XB-GENE-958628
UniProt:
Q66IL1
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All DBs
Position
4:142004434..142035721
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AA seq
938 aa
AA seq
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MSWFNTSHLSSFAKQALSQAQKSIDRVLDIKEDETAWADTIIAPFEEENGSSVKGSWENS
NWGGQSEEPDTQVGLSPTAITRPVTRTVVDESENFFSAFLTSPTSNTVSDSSVVSKPPVK
SQRLEEEEEYASPKSTVKVKQKDELNVKLLKKSACQSQRTDLETPAISSQKPSPAHSDLS
LELKCEPENEEQISDTASDATADHGAPESTPNAEPPSPTPGVTSESKDIALDNKEQKSED
RQSNTPSPPISTFSSGTSTTSDIEVLDHESVMSESSVSSRQEAADSKANLHLMQTSFQLL
SASTEYSRMEEFPKLTESCSSSDAFERIDSFSVQSMDSRSVSELNSDDELPGRGCTLVSI
AVSSPTPNVDVPDSAESKPDEDLNETLMVHSSEDTEMEESGRSATPVNSEQPELLGHEAD
DGGHEADDAAHEADDVGHGVAVELAETAPEAEFSDEDMQKIIDELTARLEKRETQLLSVS
KEKAFLEEAFDNLKDEMVRLTEECSSVSQLKDEFTLRIAEAEKRAQTACKERDIAKKEAK
VMKEELATRLNSSETAEIMKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKEKEHNHT
ITKQANKIREVEEELKLLKQTLDGKEEVEKQHRENIRKLNSMVERQEKDLSRQQADLDDL
QEKNRSLQAALDNSYRELAELHKANATKASEAQEAALSCELRAKEELCFALEKAKEESQK
QQEALAIQVTDLRLALQRAEQQAARKEDYLRQEIAELQQRLQEGETRNQELSQSVTSATR
PLLRQIENLQATLAAQTSSWEKLEKNLSDRLTESQTLLASAVEKERASTEELLAIKTQIS
AIESQNSLLRQEKIRLQAQLEVEKSRLVKIEEDHSRNQVELEHLKMEFMKAMEEAKKEKS
LLSSQLEMEKLRVEQEKKKVLLAQEAAKEKVLPSLLLK
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacacctcgcacctctccagcttcgccaagcaggctctgtcccaggcc
cagaagtctattgaccgggttctggatattaaggaggatgagaccgcctgggccgacacc
atcattgctccctttgaggaagagaatggttcctcggtcaaagggagctgggaaaactca
aactggggcggacaatcagaagaacctgatacgcaagtggggttatctccgacagcaatt
accaggcccgttacacggacagtagtggacgaatcagagaatttcttcagtgcctttctc
acttccccaacatccaacactgtctctgacagttctgtggtctccaagccccctgtcaaa
tctcagaggctggaagaggaagaagaatatgcctcacccaaatccacagtcaaggtgaaa
cagaaagatgaattgaatgttaaattgttaaagaaaagtgcctgccaaagccaaagaaca
gatttggaaacaccagccatatcttcacagaaaccatcgcctgcccattcagatctttct
ttggagttaaaatgtgagcctgaaaatgaggagcaaatatctgacacagcttctgatgct
acagcagatcatggagctccggagagcacacctaatgcagagccccccagccctactccg
ggcgttacttctgaaagtaaagacattgcactggataataaagaacagaagtcggaagac
cgtcagagtaacaccccatctcccccaataagcactttctcttctgggacgtcgaccacc
agcgacattgaagtattagaccacgaaagtgtgatgagcgagagctccgttagctcgagg
caagaagcggccgattccaaagcaaacctccatttaatgcagacatctttccagcttctc
tctgcctcaacagagtacagccgcatggaagagttccccaagctcaccgagagctgctca
tcctccgacgcctttgaaaggatcgattctttcagcgtgcagtccatggacagccgtagc
gtcagtgaactcaattccgatgatgagctccccggcagaggatgcaccctggtttccatt
gcagtcagctctcctactccaaacgtggacgtcccggattcggccgagagcaaaccagac
gaagacttaaacgagacgctaatggtgcactccagtgaggatacagaaatggaggaaagt
ggacggagcgccactcctgtaaattcagagcagcctgaacttctgggccatgaagctgat
gacgggggccatgaagctgatgatgcggcccatgaagctgatgatgtgggccatggagtt
gcagtggaattggctgaaactgcaccagaggctgaattctcagatgaggacatgcaaaag
ataattgatgaactcactgccagactggagaagagggagacacagctgctgtctgtgagc
aaggaaaaggccttcctagaagaagcttttgacaaccttaaagacgaaatggtgcggctg
acggaggaatgcagcagcgtctctcagctgaaagatgagtttaccctccgaatagcagaa
gccgaaaagagagcccagacagcgtgtaaagagcgagacattgccaaaaaggaagcaaaa
gtgatgaaggaggaattggcaacaagactcaactccagtgaaactgctgaaattatgaag
gagaaggatgaacagattcaaggtttaatggaggaaggtgaaaagctctccaaacagcag
ttgcacaactccaatattatcaagaaattacgggcaaaggagaaagagcacaaccacacc
ataaccaaacaggcaaataagatccgggaggtggaggaggaactgaaacttttaaagcag
acattagatggtaaggaagaagtggaaaaacagcatcgcgagaatatccgaaagctgaac
tccatggtggagaggcaggagaaggatctgtcgaggcagcaggctgacctggatgatctg
caagaaaagaatcgcagtctacaagctgctctggacaactcctacagggaacttgcggaa
ttgcacaaagcgaatgcaacaaaagccagcgaggcccaagaagcagcactgagttgtgaa
ttacgagccaaagaagagctttgttttgcactggagaaagctaaggaggagtctcaaaag
cagcaagaagctttggctatccaggtaacagatctgaggctggccctgcagcgagcggaa
caacaagctgccaggaaagaagattatttgagacaagaaattgctgagctgcaacagaga
ctgcaagagggggagacccggaatcaggagctgagccaaagcgtaacatctgcaacaaga
ccattactccgacagattgaaaacctgcaagcaactttagcagcacagacctcgtcttgg
gagaaactggagaagaatctttccgacagacttactgaatcgcagacactgttggcctca
gcagtggagaaagaacgtgcctccacagaagaactactagctatcaagacacagatctcc
gctatagaatctcagaacagcctgctgaggcaagagaagatcagattgcaagcacagctt
gaagtggagaagtctcgattagtgaagattgaagaagatcacagcaggaatcaggtggaa
cttgaacatttaaagatggaattcatgaaagcaatggaagaggcaaagaaagaaaagagt
ctcctctctagtcagctggaaatggagaagctgagagtggaacaggagaaaaagaaggtc
ctgctggcccaggaagctgctaaagagaaggtacttccctctctattattaaaataa
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