Xenopus tropicalis (tropical clawed frog): 780162
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Entry
780162 CDS
T01011
Symbol
galnt4
Name
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 4
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00512
Mucin type O-glycan biosynthesis
xtr00514
Other types of O-glycan biosynthesis
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
780162 (galnt4)
00514 Other types of O-glycan biosynthesis
780162 (galnt4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
780162 (galnt4)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
780162 (galnt4)
Glycosyltransferases [BR:
xtr01003
]
O-Glycan biosynthesis
Mucin-type
780162 (galnt4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
Glyco_tranf_2_2
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
780162
NCBI-ProteinID:
NP_001072705
Xenbase:
XB-GENE-5803663
UniProt:
Q08CX0
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Position
6:complement(69236983..69265990)
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AA seq
582 aa
AA seq
DB search
MRIRVRRCPLIVKTCTVLGFFMIAYILVEFSSPVFHTSVNEGLTTKRRWERVITLAEEKN
EELRQPVYKKPPPDPNMPGEWGKAARLELGPTEKKMQDESIEKYALNIYLSDQISLHRHI
MDNRMYECKSKTFNYRKLPTTSVVIAFYNEALSTLLRTIHSVLETSPAVLLREIILVDDF
SDKVYLKSQLEDYIGGLDRVRLIRTTKREGLVRARIIGATYAIGDVLTFLDCHCECISGW
LEPLLQRIGENETAVVCPVIDTIDWNTFEFYMQTGEPMIGGFDWRLTFQWHAVPEKERQR
RKSRIDPIRSPTMAGGLFAVSKKYFEYLGTYDMGMEVWGGENLELSFRVWQCGGTLEIEP
CSHVGHVFPKKAPYARPNFLQNTARAAEVWMDGYKELFYNRNPPARKENYGDISERKLLR
ERLQCKSFDWYLKNVFPDLHIPEDRPGWHGAVRSMGISNECLDYNAPDHNPTGAHLSLFG
CHGQGGNQFFEYTTMREIRFNSVTELCAEVPEQQTYIGMMHCPKDGNPVPKNIAWEFRND
GTIYHPSSGTCISSYRTSEGRADVQMKGCDPSDKNQLWKFEW
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaggatccgagtgagaagatgtccgctaattgtaaagacctgcacagtacttggcttt
tttatgatagcttatatattagttgaattttcttcccctgtgttccacacttctgtaaat
gaagggcttaccacaaagaggagatgggaaagagttatcactctagcagaggaaaaaaat
gaagaacttaggcaaccagtttataaaaagcctcctccagacccaaacatgcctggagaa
tggggtaaagctgcaagattggagcttggaccaacagagaaaaagatgcaggacgaaagc
attgaaaaatatgccttaaacatttatttgagtgaccagatatcactgcatcggcacata
atggacaacagaatgtacgaatgtaaatcaaagacattcaactacaggaagcttcctaca
acatctgttgttatagctttttacaatgaagctttgtcaacactgctccggacaatacac
agcgttctagaaacttcccctgctgtactcctaagagaaattatattggtagatgacttc
agtgacaaagtgtatttaaaatctcaacttgaagattatattggtggcctggacagggtt
cgtctgatcagaacaacaaaacgagaaggactggttcgtgcccggataattggagcaact
tatgcgataggtgatgtgctcacatttcttgactgtcactgtgagtgtatttccggttgg
ctggaaccacttttgcagaggattggtgagaatgaaactgcagtggtctgccctgtaatt
gacacaatagactggaacacctttgaattttacatgcaaactggggagcctatgattgga
ggatttgactggcgactaacattccagtggcatgcagtacccgaaaaagagcgccagagg
cggaaatctaggattgatccaatcagatctccaaccatggcaggagggctatttgctgtt
agtaaaaaatattttgaataccttggcacctatgatatggggatggaggtttggggagga
gaaaacctagaactttcatttcgggtttggcaatgtgggggaacactggagattgaacca
tgttcccatgttggacacgtattccccaagaaagctccttatgcaaggccaaattttctg
cagaacacggcccgggctgcagaagtctggatggatggatataaagaacttttttacaac
agaaacccacctgcacgtaaggaaaattatggtgatatttcagagagaaaattacttaga
gagagactacaatgcaagagttttgactggtacttgaaaaatgttttccctgatttacat
ataccagaagatcggcctggctggcatggtgcagtccgcagtatgggtataagcaatgag
tgtcttgactacaatgcaccagatcataatcccactggagctcatctctcattatttgga
tgtcatgggcaaggtggtaatcagttctttgaatatacaacaatgagagagatacgcttt
aattcagtcacagaattatgtgcagaagtccctgaacagcagacatacattggaatgatg
cattgtccaaaggatggtaaccctgttcctaaaaacattgcatgggaattcagaaatgat
ggaacaatctatcatccaagttctggaacgtgtatcagctcttaccgcacgtcagaaggc
cgagcagacgtacagatgaaaggatgcgacccttcagataaaaatcagctttggaagttt
gaatggtag
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