Xanthomonas vasicola pv. vasculorum: C7V42_13800
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Entry
C7V42_13800 CDS
T05388
Name
(GenBank) sensor domain-containing phosphodiesterase
Organism
xva
Xanthomonas vasicola pv. vasculorum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HAMP
dCache_3
Motif
Other DBs
NCBI-ProteinID:
AVQ07524
LinkDB
All DBs
Position
complement(3007538..3009904)
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AA seq
788 aa
AA seq
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MRAMRLHTRIAALLVLVLLATQALTFLAVQLATERSVKAQLGEELEIGERVWQRINVRRD
EQLLQSASVLADDFGFRAAVASGDVPTMQSALRNHAARMSSETALLLSPDGEFLTGLADL
PQAEQVRAVQALLQRAQHDGRAVGVVALDQHIVRLAVVQVLAPNRVGWIAIGNESGDGLA
QDFRSTTGLDATFFTDGPPVRVLASTLEPPARVEFAQQLPEAEKVQAASIPLTLGESRYL
VRLQSIQGDSHVRVALQASLDRAVAPYRVLKLRILLLAGLATVAALVVAIFLARGVSKPV
AQLVQAARRIQRGDYQTAVQVPPGRELAELADSFGRMQHQIASREQRILHQARHDALTGL
PNRIWLLERLKEVVEQTVASGGTAAVLILDLERFKELNDSLGHDFADQVLVEAGRRLVEV
VQEPNLVGRLGSDEFMVVVAQADAASVQQNAQFLLLQLRRPLVLPQARIQLEASIGIALI
PDHGADPDTLLRRADIARRQVGTTSAIGASVYRLGQDEQHLRRLRLTGDLRQAIGGNELT
LRFQPKICLRSDRVEQVEVLVRWHHPVLGPIGPDEFVPLAEHSGVIHSLTRFVLDQALRC
QAKWREQGLELGMAINLSALDLSDPGLPDFVRGRLEYHAVPAQSFTLELTESALMRDVEF
ALHMLHQLRSVGVRLSIDDFGTGYSSLAQLKRMPVNELKIDKSFVMQLAEGTDDAFIVRS
TIDLGHNLGLSVIAEGVENATALALLRGYGCDMVQGYLYSPPLEEAPMVAWCMRQLGMNS
AAHAGAQR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgagagcgatgcgcctgcatacccgcatcgcggccttgctggtgctggtcttgcttgcc
acgcaggcattgacgtttcttgccgtgcagctggcgaccgaacgtagcgtcaaggcgcag
ctcggcgaagagctggaaatcggcgagcgcgtctggcaacgcatcaacgtgcgtcgcgac
gagcagttgctgcagtcggcatcggtgctggccgacgacttcgggtttcgcgccgccgta
gcaagtggcgatgttccgacgatgcagtcggccctgcgcaaccatgccgcacgtatgtcg
tcagagactgcgctgctgctgtcaccagatggcgaattcttgaccggcctggccgatctg
ccgcaggccgaacaagtgcgtgcggtgcaggcattgctgcaacgagcgcagcacgatgga
cgcgcagtgggcgtggtggcgctggatcagcacatcgtgcggctggcggtggtgcaggtg
ctggcgccaaaccgcgtcggctggattgcgatcggcaacgaatccggcgatggcctggcg
caggatttccgcagcaccaccgggctggatgccaccttcttcaccgatggcccgccagtg
cgtgtgttggcctccacccttgagccgccggcacgcgtcgaatttgcgcaacaattgccc
gaggctgagaaggtgcaggctgcatcgatcccgttgacgctgggcgagtcgcgctatctg
gtcagactgcaatcgatccagggcgacagccacgtgcgggtcgcgttgcaggcatcgctg
gatcgcgctgtcgcgccgtatcgcgttctcaagctgcgcatcctgctgctggcggggctg
gcgaccgtcgctgcgctggttgtggcgatttttctcgcgcgtggcgtgagcaagccggtt
gcacaactggtacaggctgcgcgacgcatccagcgcggcgattaccagactgcggtgcag
gtcccgcccggccgcgaacttgccgagctggccgacagtttcggacgcatgcagcatcag
atcgccagccgcgagcagcgcatcctgcatcaggcccggcacgacgccttgaccggcttg
cccaaccggatctggttgctggagcggttgaaggaagttgtggagcagaccgtggcatcc
ggtggcaccgccgcggtgctgatcctggatctggagcgcttcaaggaactcaacgacagc
ctcggccacgacttcgccgaccaggtgctggtggaagccggacgccggctggtggaggtc
gtgcaggagcccaatttagtcggccggttgggcagcgatgaattcatggtggtggtggcg
caagccgatgccgccagcgtgcagcagaatgcgcagttcttgctgctgcagctgcgccgc
ccgctggtcttgccgcaggcgcggatccagcttgaagccagcatcggcatcgccctgatt
cccgaccatggcgccgacccggataccttattgcgccgcgccgatatcgcgcggcgccaa
gtcggcaccacaagcgccatcggtgccagcgtctatcgcctgggccaggacgaacagcat
ctgcggcgtttgcgccttaccggcgatctgcgtcaggccatcggcggcaacgaactcacc
ttgcgcttccagcccaagatctgtctgcgcagcgatcgggtcgagcaagtcgaagtgctg
gtgcgctggcatcacccggtgctcggcccgatcggcccggacgaattcgtcccgctcgcc
gagcactccggcgtcatccattcgctcacccgcttcgtgctagaccaagcgctacgctgt
caggcgaagtggcgcgagcaagggttggagttgggcatggcgatcaacttgtccgcgctc
gatctgtccgaccccggcttgcccgacttcgtgcgcggccgcctggagtatcatgccgta
ccggcgcagtcgttcacgctggaattgaccgaaagcgccttgatgcgcgatgtcgaattc
gcgctgcacatgctgcatcaattgcgcagcgtgggagtgcgactgtccatcgacgacttc
ggtaccgggtattcctcgttggctcaactcaagcgcatgccggtgaacgaattgaagatc
gacaagagtttcgtcatgcagttggccgaaggcaccgacgatgccttcattgtccgcagc
acgatcgatctggggcataacttgggcctgagcgtcatcgccgaaggcgtcgagaacgcc
actgcgttggcactgttgcggggctatggctgtgacatggtgcagggctatctgtattcg
ccaccgctggaggaagcgccgatggtagcctggtgtatgcgccaactcggcatgaactcg
gccgcgcacgcaggtgcacagcgatga
DBGET
integrated database retrieval system
