Xanthomonas vasicola pv. vasculorum: C7V42_19525
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Entry
C7V42_19525 CDS
T05388
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xva
Xanthomonas vasicola pv. vasculorum
Brite
KEGG Orthology (KO) [BR:
xva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xva03009
]
C7V42_19525
Enzymes [BR:
xva01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
C7V42_19525
Ribosome biogenesis [BR:
xva03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
C7V42_19525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_25
FtsJ
Methyltransf_31
Methyltransf_12
MTS
Methyltransf_5
Methyltransf_11
Methyltransf_33
Methyltransf_23
Methyltransf_24
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
AVQ08459
LinkDB
All DBs
Position
complement(4279553..4280863)
Genome browser
AA seq
436 aa
AA seq
DB search
MSADTATAGVASRLAAARVLTAVFEQDRSLKTELAATLPGIGDPRDRALVEAICFAVIRR
RPAYDVALRQWLERPLPPRDAELKALLMVGFAQLDVLQLPAHAALSATVDACRALGRPRQ
AGMVNAILRRAQREGFPAVSDDAGWPSWLRKQLRADWGDRAEGIFTASAQMALMWLRVQR
SRIDPAAYVARLVELGIRAHTDAVLPDAVRLHSAVPVSQLPGFAEGDVSVQDGSAQQVAD
ALTLAPSARVLDACAAPGGKAAHLLERYPGLQLTALDVDARRLERVQQTLQRTVPNAQVA
LHAADAADTDAWWDGQPFDAVLLDAPCSATGVVRRQPDVLLHRRADDIDALCALQARLLD
ATWRTLRPGGQLLYTTCSLLARENQTQVEAFLQRTADAQAQPLGAQFGHAAGPGRQRFPG
EQHCDGFFYALLLKAS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgacaccgcaaccgctggcgttgcctcgcgcctggcagccgcacgcgtgctg
acggcggtgttcgaacaggaccgctcgctgaaaaccgagctggccgcgacgctgcccggg
atcggtgatccgcgcgaccgcgcactggtggaggcgatctgctttgcggtcatccgccgc
cgcccggcgtatgacgtcgcgctgcggcaatggctggagcgcccgttgccgccccgcgat
gccgaactcaaggcgctgctgatggtcggcttcgcccagctcgatgtgctgcaactgccc
gcgcacgccgcgttgtcggccaccgtggatgcatgccgcgcgctggggcggccgcgtcag
gccggcatggtcaatgcgattttgcggcgcgcccagcgcgaaggatttccggcggtatcg
gatgatgccggctggccgtcgtggctgcgcaagcagttgcgcgccgactggggcgatcgt
gccgaaggtatctttaccgcgagtgcgcagatggcactgatgtggctgcgcgtgcagcgt
tcgcgcatcgacccggctgcctatgtcgcacgacttgtcgaattgggcattcgtgcacac
accgatgcggtgttgccggatgcggtgcgcttgcacagcgcagtgccggtgagccagctg
ccaggctttgccgaaggcgatgtttcggtgcaagacggctctgcgcagcaggtggccgat
gcgctgacgttggcgccgtcggcacgcgtgctcgatgcctgcgccgcaccaggcggcaag
gcggcgcatctgctggagcgttatcccgggttgcagctcactgcgctggatgtggatgcg
cgccgcctggagcgcgtgcagcagaccttgcagcgtaccgtgccaaacgcccaggtcgcc
ttgcatgcggccgatgctgcagacacggatgcgtggtgggatggccagcccttcgatgcg
gtgctgctggacgcgccgtgttcggccaccggcgtggtgcgccgtcaaccggatgtgctg
ttgcaccggcgtgccgacgatatcgatgcgttgtgtgcgctgcaggcgcggctgctggat
gcgacttggcgcacgctgcgcccaggtgggcagttgctgtacaccacctgctcgctgttg
gcacgcgagaaccagacccaggtcgaggcattcctgcaacgcaccgccgacgcacaagcg
cagcccttgggtgcgcagttcgggcatgcggccggccccggacgtcagcggtttccaggc
gagcagcactgcgacggattcttctacgcgcttttgctaaaagcctcctga
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