Xanthomonas vesicatoria: BJD12_01095
Help
Entry
BJD12_01095 CDS
T04741
Name
(GenBank) GGDEF domain-containing protein
Organism
xve
Xanthomonas vesicatoria
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Reg_prop
Y_Y_Y
Alpha-mann_mid
Motif
Other DBs
NCBI-ProteinID:
APP74086
LinkDB
All DBs
Position
complement(268859..271780)
Genome browser
AA seq
973 aa
AA seq
DB search
MGFLHRQWRSSGRGASFTAMLLLALLSFANLASAQSASIRRYAHDQGLLGLAGTCLLQTP
TTLMWVCTESGLYRYNGRIFQQVMLDGLRNEPITAISQAPDGRVWVAGFQALFIGDEHGF
RKLARDEAEHLQEGVRLASLSWGTVIANGGDLELLHARGNGRWHSQYLLDTATRVRVPEL
SKVLSLSVDGDTLWVGCAHKLCAIDARHQVTVYGPDEGVPVDRWYSVLRDHDGGLWVRGA
GTLLYRAPGASHFSVRPLPLLDSSTIGQQAPLVMDREGRVLVRRNDGLARWENGAWRSFG
TENGLPPGSSDAIVVDRDGDVWMTVDGEGLVRWAGYEWIENWDASQGMPAAPTWSIARDG
QNALLVGNEHGVGRQARPDERFVPALAQSGIQIVGLARSADNSVWTLNSAGFVRRNWPDG
RSAEIGKLPRTGRRLHLDRQGRLWILTLGGLFVIERPLDGGTLQPVAGMPTIAYTDIQQT
ADGTLWVSSANGLFRLQGERWSKVKVKVNGGDADPWISKFHISDSGEVLLAFYRPGLWHG
MLLADGLDLQAISDEALRDVGVYLMHSDSLGRVWVGHARGVDVYNGERWAHLSQSQGLLW
DDVSEAAFYEDPDGSVWIGTSRGVSHLQDPARLFDERQPSVRIDSLSRGGVPIRAGQLLG
WSDTPLHIELSTMEVYDDPSRLTVRYRVLGLHNEWIESDDLSIDQPPLPSGHFRLQVQLL
DRYRRTASPVVDLPFAVAPLWWRSPPAIALYVLIGGGLLIGLWSWRHRHLVARERMLAEL
VAERTYQLEHEKRDLESARAALALKASHDALTGLLNRSGILDAMTEELQHCAHAEHPLAV
VLIDLDHFKQVNDEHGHLVGDAVLAKVGARLTACLRDSDKVGRYGGEELLLLLPGMTRQS
QHRLRAIHEAISLPPYDVGAVRPLQVTCSVGVAWFRIGDTAATLLARADEALYRAKGHGR
NRIEPEEVEISAA
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
gtggggtttttgcaccgccaatggaggtcgtcaggccgaggcgcatcgtttactgcgatg
ttgctgctggcgttgctgtcgtttgccaatctggccagcgcacagagcgccagcatccgc
cgctatgcccacgatcagggcctgctcgggcttgccggcacctgcctgttgcagacccct
accaccttgatgtgggtgtgtaccgagagcggcctgtatcgctacaacggccgcattttc
cagcaagtgatgctggacggactgcgcaacgagccgattaccgcaatcagccaagcgccc
gatgggcgtgtgtgggttgccggcttccaggcgctgttcatcggcgacgagcatggcttt
cgcaaactcgcgcgcgatgaagccgaacacctgcaggagggtgtgcggcttgccagcctt
tcatggggcacggtgattgccaacggcggcgatctggaactgctgcacgcacgcggcaat
ggccgctggcatagccaatatctgctggacaccgccacgcgggtgcgggtgcccgagctt
tccaaagtcctcagtttatcggtggacggcgacacgctctgggtcggctgcgcgcacaag
ctgtgcgccatcgatgcgcggcaccaggtgacggtgtacggccccgacgagggcgtaccg
gtcgatcgctggtacagcgtgttgcgcgaccatgacggcggtctgtgggtgcgcggtgcc
ggcaccctgctctaccgcgcgccgggcgcgagccatttcagtgtgcggccgttgccgctg
ctcgacagcagcacgatcgggcagcaggcgcccttggtgatggaccgcgaagggcgcgta
ctagtgcgtcgcaacgacggcctggcgcgctgggaaaacggcgcctggcgcagcttcggc
acggagaacggactgccgccgggcagcagcgatgccatcgtggtggaccgcgatggcgac
gtctggatgaccgtggacggcgaaggcctggtgcgctgggccggctacgaatggatcgaa
aactgggacgcctcgcaaggcatgccggccgcacccacctggtccatcgcacgcgatgga
caaaatgcgctgctggtcggcaacgagcacggcgtgggacgtcaggcccggccggacgag
cggtttgtcccggcgctggcgcaatcgggcatccagatcgtgggcttggcgcgtagcgcc
gacaacagcgtgtggacactgaattctgctggcttcgtgcgccgcaactggcccgatggc
cgcagcgccgagatcggcaaacttccgcgtaccggccggcgcctgcatctcgatcgccag
ggtcgcctgtggattctcacgctcggtggcctgttcgtgatcgagcgtccgttggacggc
ggcaccttgcagcctgtcgccggcatgccaacgatcgcctacaccgatatccagcagacc
gccgacggcacgctgtgggtgtccagcgccaatgggctattccggttgcagggcgagcgc
tggtccaaggtgaaggtgaaggtcaacggcggcgacgccgacccatggatcagcaagttc
cacatcagcgacagcggcgaagtgttgctggcgttctatcgccccggcctgtggcacggc
atgttgctcgccgatggcctggacctgcaggcgatcagcgacgaagcgctgcgcgacgtg
ggcgtgtacctgatgcatagcgacagcctgggccgggtctgggtgggccacgcgcgcggc
gtggatgtctataacggtgagcgctgggcgcatctgtcgcagtcgcaaggcctgctctgg
gacgatgtctccgaagccgcgttctacgaagatccggacggctcggtgtggatcggcacc
tcgcgcggcgtcagccatctgcaagacccggcgcgcctgttcgacgagcgccagcccagc
gtgcgcatcgacagcctcagccgcggcggcgtaccgatccgcgccgggcaactgctgggc
tggagcgacacaccgctgcatatcgagctgtcgacgatggaggtctacgacgaccccagc
cggttgaccgtgcgttatcgcgtgctcggcctgcacaacgaatggatcgaaagcgacgat
ctgtcgatcgatcaaccgccgctgccgtccgggcatttccgcctgcaggtgcaactgctg
gaccgctatcggcgcaccgcttcgccggtggtggatctgccgttcgcagtggcgccgctg
tggtggcgcagtccgccggcgattgcgttgtatgtcttgatcggcggcggcctgctgatc
gggctgtggagctggcgacaccgtcatctggtggcgcgcgaacgcatgctggccgagctg
gtggccgaacgcacctatcagctggaacacgaaaaacgcgatctggaaagcgcccgcgca
gcattggccttgaaggccagccatgacgcgctcactggccttctcaaccgctccggcatt
ctcgatgccatgaccgaagagctgcagcactgcgcgcacgccgagcacccgttggcggtg
gtgctgatcgacctggaccacttcaaacaggtcaacgacgaacatggccatctggtcggc
gacgcggtgctggccaaggtcggcgcacggctcaccgcctgcctgcgcgattcggacaag
gtaggccgctacggtggcgaagaactgctgttgctgctgccaggcatgacacgacagagc
cagcaccggctgcgcgccatccacgaagcgatcagtctgccaccctacgacgtgggtgcc
gtgcgaccgctgcaggtgacctgctcggtcggcgtggcatggtttcgcatcggcgacacc
gccgccaccttgctggcgcgtgcagacgaggccttgtatcgggccaagggccacggccgc
aaccgcatcgagccggaggaagtcgagatttcggcggcttga
DBGET
integrated database retrieval system
