Yersinia aldovae: AT01_2298
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Entry
AT01_2298 CDS
T03605
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
yal
Yersinia aldovae
Pathway
yal00521
Streptomycin biosynthesis
yal00523
Polyketide sugar unit biosynthesis
yal00525
Acarbose and validamycin biosynthesis
yal00541
O-Antigen nucleotide sugar biosynthesis
yal01100
Metabolic pathways
yal01110
Biosynthesis of secondary metabolites
yal01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
AT01_2298 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AT01_2298 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AT01_2298 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AT01_2298 (rfbB)
00525 Acarbose and validamycin biosynthesis
AT01_2298 (rfbB)
Enzymes [BR:
yal01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AT01_2298 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
NAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AJJ65013
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Position
complement(2481221..2482288)
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AA seq
355 aa
AA seq
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MRRILVTGGAGFIGSAVVRHIIDGTSDSVLVVDKLTYAGNLESLAVVAHSERYAFEQVDI
CDRAELDRVFAQYQPDVVMHLAAESHVDRSIDGPAAFIETNVVGTYQMLEAARHYWQPLD
AEKKLAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQRTYGL
PTLVTNCSNNYGPYHFPEKLIPLVILNALAGKPLPVYGNGAQVRDWLFVEDHARALYQVV
TEGVVGETYNIGGHNERKNIEVVETICALLDELVAEKPAGIAHYRNLITFVKDRPGHDMR
YAIDASKIERELGWRPQETFESGIRKTVLWYLNNKSWWQRVQDGSYAGERLGLSD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
ttgagacgtattctggtcaccggcggagccggttttatcggctccgccgtggtaagacat
attattgatggcacctcagatagcgtgttggtggtggataagctcacctacgctggcaat
ctggagtcactggcggttgtcgctcacagtgagcgctacgcttttgaacaggttgatatt
tgcgatcgtgctgaactggatcgtgtttttgcgcaatatcagccagatgtggtaatgcat
ctggccgcagaaagtcatgttgaccgctctatagatggcccggctgcttttatcgaaacc
aacgtggtcggtacttaccagatgttggaggccgcgcgccattattggcaaccgctggat
gctgagaaaaaattggcgtttcgcttccatcatatctcaacggatgaagtgtatggcgat
ctgcatggtacggatgacctgtttactgaaacaaccccttatgcaccaagtagcccctat
tcagcctctaaggcatccagtgaccatctggtgcgcgcctggcagcgaacttacggttta
ccgactttggtgaccaattgttccaataactacggcccatatcatttccctgagaaattg
atcccactggtgattttgaatgcgctggcgggcaaaccgctgccagtctatggcaatggc
gcgcaggttcgtgattggctgtttgttgaagatcacgcccgcgccttgtaccaagtggtg
accgaaggtgtggtgggggaaacctacaatattggcggccataacgagcgcaagaatatt
gaagtggtggaaaccatctgcgcgttattggatgaattggttgcggaaaaaccggcaggc
attgctcactatcgcaacttgattacctttgtcaaagaccgcccaggccacgatatgcgt
tatgccatcgatgccagcaaaattgagcgggagctgggctggcggccacaggaaaccttc
gaaagtggcatccgcaagaccgtattatggtatttgaataataaatcttggtggcagcgt
gttcaggatggttcttacgccggtgagcgtctgggcttgagtgactga
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