KEGG   Yersinia aldovae: AT01_3024
Entry
AT01_3024         CDS       T03605                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family protein
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
yal  Yersinia aldovae
Brite
KEGG Orthology (KO) [BR:yal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:yal02048]
    AT01_3024 (hsdR)
Enzymes [BR:yal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     AT01_3024 (hsdR)
Prokaryotic defense system [BR:yal02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   AT01_3024 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 EcoR124_C ResIII HSDR_N DEAD
Other DBs
NCBI-ProteinID: AJJ63673
LinkDB
Position
complement(3270939..3274166)
AA seq 1075 aa
MTTFKTEAQFEQAFIEVLTHKGWETEILKNKTEADLLQNWASILFENNRQRDRLNDVPLT
DTEMQQIIEQIKELKTPLKLNGLINGKTVAIKRDNPADTLHMGKEVSLKIYDRQEIAAGQ
SRYQIVQQPKFERGSPLRNDRRGDVLLLINGMPVIHVELKRSGIPVSQAVNQIEKYSKEG
VFSGLFSLIQVFVAMEPNEAKYFANPGLDGKFNTDYQFNWADFNNEPMNHWKDIASTLLS
IPMAHQLIGFYTVADDTDGVLKVMRSYQYYAANAISDKVAKTNWQQLGSAANNPDRLGGY
VWHTTGSGKTMTSFKSAQLIAQSKDADKVIFLMDRIELGTQSLAEYRNFAGDGEDVQATE
NTHVLITKLKSTAPADTLIVSSIQKMSNIFEEVDDEGTATNSADIEKIRAKRLVFIIDEA
HRSTFGDMLIIIKRTFPRALFFGFTGTPIQEENEKNGNTTSTVFGNELHRYSIADGIRDG
NVLGFDPYKVCTFKDKDLRQAVALEQAKADSVADAMSTAAKKKKFNYFMNDVPMAGHKDA
TGEYIKGIEDYVPKEQYLTETHQEKVVEDILAEWDVLSQANKFHAILATSSIAEAIDYYR
RLKAAKPELKISALFDPNIDNDGSGDRGPTFKGDGLDEIMADYNARYGQDFDFARHAAFK
KDLAARLAHKKPYERIHTEPSKQLDLLIVVDQMLTGFDSKWLNTLYLDKVIKYQNIIQAF
SRTNRLFGPDKPHGIIRYYRYPHTMEQYINDAVKLYSGDRPIGLFVDRLESNLKAINELV
VDITELFVSAGVENFEKLPDDIETCAQFAKLFNTFSQHLEAAKVQGLHWEQSIYSFTEND
VEHEVTLAIDEQTYLSLVLRYKELVGKGDGGGAGGDDVPFDISGYLTEIDTGKIDADYMN
SRFDKYLKELNKHQDSASIESTLNELHKSFASLTQSEQKYAKLFLHDLQRGDAQLIEGHT
FRDYINTYKDNAENAQLNAVVNALGLDKELLMALMADSVNDKNLNDFGRFDALKDSVNTA
KARGYFEKQDGITIPLFKLNIRIDQFLKQFILAQTDDFLSDRDVVGDVMDVPPSA
NT seq 3228 nt   +upstreamnt  +downstreamnt
atgaccacctttaaaaccgaagcgcaatttgagcaggcctttattgaagtactgacccat
aagggctgggaaacagagatactcaaaaataaaaccgaagcggatttactgcaaaattgg
gcgtccattttatttgaaaataatcgccagcgggatcgcttaaacgatgtgccgttaacc
gatacggaaatgcagcaaattattgagcaaataaaagaacttaaaactccgctcaagctc
aacggtttaattaacggaaaaaccgtggcgattaagcgtgataacccagccgataccttg
catatgggcaaagaagtcagcttaaaaatatacgatcgccaggaaatcgccgcgggccaa
agccgttaccaaattgtgcagcaacccaaatttgaacgcggcagccctttgcgcaatgac
cgccgtggcgatgtgctcttactgatcaacggtatgccggtgatccatgtcgagctaaag
cgcagcggcattccggttagccaagcagtaaatcaaattgaaaagtacagtaaagagggt
gtatttagcggcctcttttcgctcatccaagtgtttgtggccatggagccaaacgaggcc
aaatactttgccaaccccgggctagacggcaagtttaataccgactatcaatttaactgg
gccgattttaataacgagcccatgaaccactggaaagacatcgcctctaccttactttct
atccctatggcacaccagttgattggcttttataccgtcgccgacgataccgacggcgtg
cttaaggtgatgcgcagttatcagtattatgccgccaatgcaatatctgacaaagtggcc
aaaaccaactggcagcaactgggtagcgctgccaataaccctgaccgcctcggtggttat
gtgtggcataccaccggttcgggtaaaaccatgaccagctttaaatcggcgcagttgatt
gcacaatcgaaagatgccgataaagtgatttttttaatggacaggattgagctgggcacc
cagtcgctggcggaatatcgcaattttgctggcgatggcgaagacgtgcaagccaccgaa
aatactcatgtcctcattaccaaattaaaaagcaccgctcccgccgatacattaattgtt
agctctattcaaaaaatgagtaatatttttgaagaagttgatgatgagggaacagcaaca
aattcggccgacatagaaaaaatccgcgctaagcgtttggtgtttattatcgatgaggcg
caccgctctacctttggcgacatgctgattattattaaacgtacctttccgcgcgccttg
ttttttggctttaccggtacgccgattcaagaagaaaacgaaaaaaacggcaataccacc
agtaccgtatttggcaacgagctacaccgctacagcattgctgacggtattcgcgacggc
aatgttttgggctttgacccttacaaagtctgtacctttaaagataaagatctacgccag
gccgtcgcccttgaacaggctaaggccgattcggttgcggatgcaatgtctacggctgcc
aaaaagaaaaaatttaattattttatgaatgatgtgccaatggctggccataaagatgca
acaggcgagtatatcaaaggaatagaagattatgtgccaaaagagcaatatctcactgaa
acccatcaagaaaaggtagtagaagatattctggctgagtgggatgtgctcagccaggcc
aataaattccacgctattttggccactagcagcattgccgaagccattgactattaccgc
cgtttaaaagccgccaaacctgaacttaaaatatcggctctatttgacccgaacattgat
aacgacggcagtggcgaccgtggccccacctttaaaggcgatggcctggacgaaattatg
gccgactataacgcgcgttatggccaggactttgattttgcccgccacgcggcctttaaa
aaagatttagcggcacgccttgcccataaaaagccttacgagcgcattcataccgagcct
tcaaagcaattagatttactgattgttgtagatcaaatgctcactggctttgactctaaa
tggcttaataccttgtatttagataaggtgattaaataccaaaatattattcaagcgttc
tcacgcaccaatcgcttgtttggccccgacaaaccccacggcatcatccgttattatcgt
tatccacacaccatggaacagtacattaacgatgcggtaaaactctattccggcgacaga
cctatcggcttatttgttgataggttagaaagcaaccttaaagccataaatgaattagtg
gtggacattaccgagctattcgtcagtgcgggtgttgagaactttgaaaaactgcccgac
gatatagaaacctgtgcccaattcgctaaattatttaacacctttagccaacacctggaa
gcagctaaagtacaaggtttacattgggaacagtcgatctattcctttactgaaaatgat
gtagaacatgaggtaacgctggccatagacgaacaaacttacctgagcctggtcctgcgc
tataaagagttggtaggcaaaggtgatggcggtggcgcaggtggcgacgatgtgcctttt
gatattagtggttatttaactgaaatagataccggcaaaatcgatgccgactacatgaac
agccgctttgataaatatttaaaagagctgaataaacaccaagactctgcaagcattgaa
agcacattaaatgagctacacaagtcgtttgcatcgctcacccaaagcgagcaaaagtac
gccaagctcttcttgcacgacttgcagcgtggcgatgcccagttaattgaaggccatact
tttagagactacatcaacacctacaaagataatgctgaaaacgcgcaattaaatgccgtt
gttaatgctcttggtttagataaagaactactcatggcattaatggctgatagtgttaat
gataaaaatctcaatgattttggtcgcttcgatgcattaaaagattcggtaaatacagcg
aaagccaggggctattttgaaaaacaagacggtataaccatacctctatttaagctgaat
attcgcattgatcagtttttaaagcagtttattttggcacaaacggatgatttcttaagt
gacagagatgttgttggtgatgtgatggacgtccctccctcagcgtaa

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