Yersinia aldovae: AT01_457
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Entry
AT01_457 CDS
T03605
Name
(GenBank) type I secretion system ATPase family protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
yal
Yersinia aldovae
Pathway
yal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AT01_457
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yal02000
]
AT01_457
02044 Secretion system [BR:
yal02044
]
AT01_457
Transporters [BR:
yal02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AT01_457
Secretion system [BR:
yal02044
]
Type I secretion system
RTX toxin transporter
AT01_457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_18
AAA_22
Zeta_toxin
AAA_33
Peptidase_C39
DUF87
AAA_5
AAA_21
ABC_ATPase
PRK
Cytidylate_kin
AAA_29
AAA_PrkA
SbcC_Walker_B
APS_kinase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AJJ64694
LinkDB
All DBs
Position
complement(487025..489151)
Genome browser
AA seq
708 aa
AA seq
DB search
MDNHIFSSLICASRLLRLAGVNAEEIEVFTQKMAIETSTMGTLKSLNHYLKQYSHTSSAR
LKIKKLPLEQLKPEQLPLAFRDTQGKFILLARINKDQVLLQHADSRQPQIIDYKDFTLLW
SGVVFSCSHSRFDIRWFIPVLLRHKRPLVQVLVLSLLLQFLALISPLFFQVIMDKVLVHN
ALTTLDVLIIVLVIVGIYEVILKALREYLFTHTTTRVDILLGGKLFQHLIRLPLSYFKSR
HVGNIVARVRELDNVREFITGSALTLCVDVVFTFVLFIVMWCISPLLTSIILAALPLYFL
LAKLTTRPLQEKVEVLCCCAAQNGAFLTETVAGVETVKSLALEPRMQQRWEGQTRDFAQA
NFRVQNLQNLSSQAAQLLQKVAGTLVIVVGAYQVMSVQLSIGQLIAFNMLAVQALMPMSK
LVDLWQQSIRAEVGLKLISDILSLPTEQAVGGAPPQRDFHGNIELNDVVFRYRPDLDPVL
RRFSLSLRAGEHIGLVGPSGSGKSTVARLLQRLYHVEQGTITIDGCPINNFSPEYLRRQV
GVVMQESYLFNRTVRENIAHSRPTASLDDVVDAACLAGANAFILALPLGYDTVLSEGGSS
LSGGQRQRIAIARTLLANPRILIFDEATSALDDESQAEVQKNMARITAGRTVITIAHRLS
TVRHCNRIAVITQGQVTELASHDDLLQLNGSYARLWQQQSEFSGEEIK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggataatcatattttctcctcattgatatgcgcatcgcgattacttcgcttggcggga
gtgaatgctgaggagatagaagtcttcacacaaaaaatggcgatagaaacctctactatg
ggtacgctgaagtcacttaaccattatttgaagcaatactcacacacttcatcagcccgg
ttaaaaataaagaaactgccactcgaacaactgaaacctgaacaattacccctcgcattt
cgcgacactcagggaaagtttatcttgttagcacgcatcaataaggatcaggtgctgctt
cagcacgctgatagcaggcaaccacaaataattgattataaagactttactctattgtgg
agtggcgtcgtgttctcttgcagtcattcacgctttgatattcgctggtttattcccgtg
ttactgcgccacaagcggccattggtgcaagtattggtgttatcgctgctgctccaattt
ttggcgctgatctcaccgctcttctttcaggttattatggataaagtattggttcataat
gcactgacaacacttgatgtactgattatagtactcgttattgtgggtatatatgaagtg
atattaaaagccttacgggaatatctttttactcacacgacaacgcgcgtagatatttta
cttggcggaaagttatttcaacacttaatccgattgccattaagttattttaagagtcgt
catgttggaaatattgtcgccagagtgcgtgagttagataacgtccgtgaattcatcacg
gggtcggctctgacgttatgtgtcgatgtggtgtttacctttgtattatttatagttatg
tggtgtatttcaccattacttacgtcaataatattagccgcattaccgctctatttctta
ttggctaaactgaccactcgccccttacaagagaaagttgaagtgctgtgttgctgtgct
gcgcaaaacggggcttttctcactgaaaccgtggctggcgttgaaacagtaaaaagtttg
gcgctggaaccccgaatgcaacagcgctgggaggggcaaacgcgtgactttgctcaggcc
aacttccgggtacaaaatctgcaaaacctcagcagtcaggccgctcaactgctgcaaaaa
gtcgcaggcacactggtcattgtggttggcgcatatcaggtaatgtcggtgcaactcagt
attggccagctaatagcctttaatatgctggcagttcaggcattaatgcccatgagtaaa
ttggttgatttatggcaacaaagtattcgcgcagaagttgggttgaaactgatatctgac
attctcagtttgcctactgagcaggcggtcggtggtgcgccaccgcagcgcgactttcat
ggcaacatcgagctgaacgatgtggtcttccgctatcgcccagacttagacccggtatta
cgccgtttctcactatccttgcgcgctggcgaacatatcgggttggttgggccgtcgggt
tcaggtaaaagtacggtggcccgcctgctacaacggttataccacgttgagcagggcacg
attaccattgatggttgcccaataaacaatttctcccctgaatacttgcgccgacaagtg
ggggtggtgatgcaggaaagttatctgtttaaccgtactgtgcgtgaaaacattgcacat
tcacgcccgaccgcatcattagatgacgttgttgatgctgcgtgcctggcgggggccaat
gcctttattctggctctgccgttaggttatgacaccgtattgtcagagggcggatcatca
ttatcgggtgggcaacgtcaacggattgccattgcccgtaccttattagccaacccgcgt
attttgatttttgatgaagcgaccagcgcactggatgatgaatcgcaagcagaagtacag
aaaaatatggcccgtatcaccgccggtagaaccgttatcactattgctcaccgcttatcg
acggtacggcactgcaaccgcatcgcggtgataacgcaaggtcaggttacggaactggcc
agtcatgatgatttactgcaattgaacggtagctatgcacggctttggcagcagcaatct
gagtttagcggtgaggaaataaaatga
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