Yersinia enterocolitica LC20: LC20_04433
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Entry
LC20_04433 CDS
T03179
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
yel
Yersinia enterocolitica LC20
Pathway
yel00550
Peptidoglycan biosynthesis
yel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LC20_04433 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
yel01003
]
LC20_04433 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yel01011
]
LC20_04433 (mrcB)
Enzymes [BR:
yel01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LC20_04433 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LC20_04433 (mrcB)
Glycosyltransferases [BR:
yel01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LC20_04433 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
yel01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LC20_04433 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
PBP1_TM
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
AHM75686
UniProt:
A0A7U4K2M6
LinkDB
All DBs
Position
complement(3843235..3845721)
Genome browser
AA seq
828 aa
AA seq
DB search
MSGDDREPIGRKGKKAQPKAAPKRPVRRRRDEDEYEDEDYLDDADQDDDDYDDEEEPMPR
KVASRPPRKKRRWLGLFIKLFLVGAVVLAIYGVYLDSQIRSRIDGKVWQLPATVYGRMVN
LEPGMSYSKKEMIDLLEGMQYRQVTRMTRPGEFTVQGDSIDILRRPFDFPDAKEGQIRAR
LVFKNDRLAQIQNLDNQRDFGFLRLDPKLITMLQSPNGEQRLFVPRAGFPDLLVDTLLAT
EDRHFYEHDGVSPYSIGRAVVANLTAGKAVQGGSTLTQQLVKNLFLTNERSLWRKLNEAY
MALLVDYRYSKDRILELYLNEVYLGQSGSDQIRGFPLASLYYFGRPVNELSLDQQAMLVG
MVKGASLYNPWRNPALALERRNLVLRLLQNQGVIDAELYTMLSARPLGVQPKGGVITPQP
AFMQMVRQELQQKLGDKINDLSGVKIFTTLDPVSQDAAEKAIEDGIPALKAARHLDDLEA
AMVIVDRFSGEVRAMVGGAQPQFAGFNRAMQARRLVGSLAKPPTYLTALSEPDKYRLNTW
LSDQPLSIKLSNGTSWQPKNYDRQFRGQVMLVDALANSLNVPTVNLGMSVGLDQISAMLQ
RLGIPKAVINPVPAMLLGAIDLTPIEVAQEYQTIASGGNRAPLSAVRSVIAEDGTVLYQS
FPQAERMVPAQAAYLTLYAMQQGVARGTSRSLSVKFSKYNLAAKTGTTNDLRDSWFAGID
GKEVAIAWVGRDNNGPAKLTGANGALTLYRRYLENQTPLPLVLQPPEGISQMNIDSAGNF
VCGDGSGMRSIPVWTENPQGLCQAAQPAEQAKPDGDGVAGWIKDMFGQ
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggatgaccgcgagccaatagggcgcaagggcaagaaagcccaacccaaagct
gcaccaaaacggccagtgcgccggcggcgtgatgaagatgaatacgaagatgaagattat
ttagatgacgcagaccaagacgatgatgactatgacgacgaggaagaaccgatgccaaga
aaggtagcatcacgtccgccccgcaaaaaacgccgttggcttggcttatttatcaaactg
ttcctggtcggcgcggtggtattggctatttatggcgtttaccttgactcgcaaattcgt
agccgaattgatggcaaggtttggcaattgcccgccactgtttatggccgcatggtgaac
cttgagccggggatgtcttacagcaaaaaagaaatgatcgatttgctggagggcatgcaa
taccggcaggttacccgtatgactcgcccgggcgaatttaccgtgcagggtgacagcatc
gatattttgcgtcgcccatttgatttccctgacgcgaaagaaggccaaattcgtgcgcgt
ttggtgtttaaaaatgatcggctagcccagattcaaaacctggataatcaacgcgatttt
ggtttcctgcggcttgatcctaagttgataaccatgctgcaatcgccgaatggtgagcag
cgcttgttcgtgccgcgggctggcttccctgatttgctggttgatactttgctggcaaca
gaagaccgccatttctatgagcatgacggtgtcagcccctattccattggccgcgccgtg
gtggctaacctgactgccggtaaggcggtacagggcgggagtaccctgacacagcaattg
gtcaaaaacttgttcctgaccaatgagcgttcgctgtggcgtaagcttaatgaagcctat
atggcgctgttggtggattaccgttacagcaaagaccgaattctggaactgtatctgaat
gaagtgtatctcggccaaagtggcagtgatcagattcgcggtttcccgctggcgagtttg
tattactttggtcgaccggtgaatgaattgagcctcgaccagcaagccatgctggtgggg
atggtgaaaggggcctcgctgtacaacccatggcgcaacccggctctagcactcgagcgc
cgtaacttggtgctgcgtttattgcaaaatcagggggtgattgatgccgagctgtatacc
atgctcagcgcccgcccactgggggtgcagccgaaaggtggggttatcactcctcaacct
gcttttatgcagatggtgcgccaagagttgcaacagaagttgggcgacaagattaacgac
ttgtccggggtgaaaatcttcaccacgctagatccggtatcacaggatgcggcagaaaaa
gccatcgaagatgggatcccagccttgaaagctgcccgtcatttggatgatttggaagcg
gcaatggtgattgtcgaccgtttcagtggtgaagttcgtgctatggtcggtggcgcacag
ccgcaattcgccggttttaaccgcgcgatgcaggcgcgccgtttggtggggtcgctcgcc
aagccaccgacttatcttaccgccttgagtgagccggataaataccgacttaatacttgg
ctgtctgaccaaccgctgtcgattaagttatccaacggcacatcatggcagcctaaaaac
tacgatcgtcagttccggggtcaggtgatgctggttgatgctttagccaactcgctgaac
gtgccgacggttaatctggggatgtctgtcggcttggatcagataagtgccatgctacaa
cgtctggggatcccgaaagcggtgattaaccccgtgccggcgatgctgctgggggcgatt
gacctgacgccgattgaagtcgcgcaggaataccagactatcgccagtggcggcaatcgt
gcgccattatctgccgtgcgctcggtgattgctgaagacggtacggtgctgtatcagagc
ttcccgcaagcggagcgcatggtacctgcacaggccgcctatctcactctttatgctatg
caacaaggggtggcgcgtggaacatcgcgttcattatcagtgaaattctcaaaatacaat
ctggccgccaaaacgggtacaaccaatgatctacgtgatagttggtttgccggtattgat
ggcaaagaggtggcgattgcttgggtagggcgcgacaataatggcccagccaaattgacc
ggtgctaacggcgcattgactttgtatcgccgctatctcgagaatcaaacgccattaccg
ctggtattgcagccaccagaaggaattagccagatgaacattgattcggctgggaatttt
gtctgtggtgatggcagcggtatgcgctcaatcccggtgtggacagaaaatccgcaaggg
ctgtgtcaggcggcccaaccagcagagcaagccaaacccgatggtgatggtgtggcaggc
tggattaaagatatgttcggccagtaa
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