Yersinia enterocolitica WA: CH47_4038
Help
Entry
CH47_4038 CDS
T03643
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
yew
Yersinia enterocolitica WA
Pathway
yew02020
Two-component system
yew02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH47_4038 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CH47_4038 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yew03021
]
CH47_4038 (rpoN)
Transcription machinery [BR:
yew03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CH47_4038 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AJI83927
UniProt:
A0A485DFM1
LinkDB
All DBs
Position
complement(4378142..4379575)
Genome browser
AA seq
477 aa
AA seq
DB search
MKQGLQLKFSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIEAKE
TIDSESLDTREALEQKDMPEELPLDATWDEIYTAGTPSGMGNDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSETDAAIATSIVDAVDETGYLTVPLEDILESMGDENVALDEVEAVLK
RIQHFDPIGVAARNLRECLLVQLSQYDKDTPYLAEARLVISEYLDLLGNHDFRTMIRLSR
LKEDTLKEAIALIQSLDPRPGQSINTGESEYVIPDVLVRKDKGHWTVELNADSIPRLKIN
QQYAAMGSNTRNDSDGQFIRSNLQEAKWLIKSLESRNETLLKVARCIVEQQVAFFENGPE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLVAAENPAKPLSDSKLTTLLCEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaagttcagccaacaactggcaatgactccgcagctacag
caggctattcgcctgttgcagctttctacgctagaactccagcaggagattcagttagcg
ctggagagcaaccccctgcttgagcaaactgatcttcatgaagagatagaggcaaaagaa
acaatagacagtgaatcgcttgatacccgcgaagcactggaacagaaagatatgccggaa
gagttgccactggatgctacctgggatgagatttacaccgcaggcacgccgtcgggtatg
ggcaatgattacagcgacgatgaactgccggtctatcagggcgaaaccactcaaacgctg
caagactatttgatgtggcaagtagacttgaccccgttctcagaaactgatgccgccatt
gcaacatcgatcgttgatgcggttgatgaaaccggttatctcactgtgccactggaagac
attctggaaagcatgggggatgaaaacgtcgcattggacgaagttgaagctgtgctcaag
cggatacaacactttgatcctattggtgtagccgcgcgtaacctgcgcgagtgcctattg
gtacagctatcgcaatatgacaaagacaccccctatctcgctgaagcacgcctggtcatt
agcgaatatctggatttgctaggcaaccatgatttccgtacgatgattcgtttaagtcgg
ctaaaagaagatacacttaaagaggccattgccctgattcagtcactggatccgcgccca
ggtcagtctatcaataccggggaatctgagtatgtgattccagatgttctggtacgtaaa
gacaaagggcactggacggtcgagcttaatgccgatagcattccacgcctgaaaatcaac
cagcagtacgcagcgatgggcagcaatacccgtaatgacagtgacgggcagttcattcgt
agcaatttgcaagaagcaaaatggttgataaaaagccttgagagccgtaatgaaacgcta
ttgaaagtggcgcgttgcattgtagagcagcaggtggcgttttttgaaaatgggcctgaa
tttatgaaacccatggtgctggcagacattgcccaagccgtggatatgcatgagtcgaca
atttcccgtgtgaccacgcagaagttcctgcacagtcctcgaggcattttcgaactgaaa
tatttcttctccagtcacgtcaatacagatagcggaggcgaagcttcttctactgcgatt
cgtgcactggtgaaaaaattggttgcggcagaaaatcctgccaaaccacttagtgacagt
aaactgaccacactattatgtgaacaaggcattatggtggctcggcgaaccgtcgcgaag
tatcgagagtcgttatccatcccgccgtcaaaccagcgtaaacagttggtttga
DBGET
integrated database retrieval system