Yersinia enterocolitica subsp. palearctica Y11 (serotype 0 3): Y11_17991
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Entry
Y11_17991 CDS
T02010
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
yey
Yersinia enterocolitica subsp. palearctica Y11 (serotype:0:3)
Pathway
yey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Y11_17991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yey03019
]
Y11_17991
Enzymes [BR:
yey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Y11_17991
Messenger RNA biogenesis [BR:
yey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Y11_17991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
CBY26382
UniProt:
A0A0H3NPR2
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All DBs
Position
complement(1804580..1805935)
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AA seq
451 aa
AA seq
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MSFDSLGLNADILRAVEEQGYLVPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSQDQQPIKGRRPVRALILTPTRELAAQIDENVQSYSKYLKLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKGLASKLLHNPASVEVARRNTASEQIAQSVHFVDKNRKRELLSQMI
GEGNWQQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALDGYEPDPSIKADPIQNGRQGRGAQRPGMGRGSSAGRPQNGGAAAGRG
DSRTSRPRSQADGQRRPAGPSSRGRSRKPGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggtttaaacgccgacatcctgcgtgctgttgaagagcagggc
taccttgtgccgacgccaattcaacgtcaggcaatccctgtggtactggaaggccgtgat
ttaatggccagcgcacaaaccggtaccggtaaaaccgctggtttcaccttgccattgttg
caattgctgagtcaggaccaacagcctattaaaggccgtcgcccggtgcgcgcgttgatt
ttgacgccgactcgcgaactggctgcgcagattgacgaaaacgtccagagttacagcaaa
tacctgaagctgcgttcgctggtggtatttggtggcgttagtattaacccacagatgatg
aaattgcgtggtggtgttgatattttggtcgccaccccgggccgtttgctggatctggaa
catcagaacgctgttgatttgtccaaaattgaaattttggtattggacgaagccgaccgt
atgctggatatgggctttattcacgatatccgccgtgttttggcaaaactgccagccaag
cgtcagaacttgctgttctccgccaccttctctgatgagattaaaggtttggctagcaag
ctgttgcataaccccgcttctgttgaagtggcgcgtcgcaacactgcttctgaacaaatt
gcacaaagcgttcattttgtggacaaaaaccgcaagcgcgagctgttgtctcagatgatt
ggcgaaggtaactggcagcaagtattggtgttcaatcgcaccaaacatggcgctaaccat
ttggctgaacaattgaataaagacggtattactgccgccgctattcacggtaacaagagt
cagggcgcgcgtactcgtgcattggctgattttaaagatggcaaaatccgtgtactggtc
gcgactgatatcgccgctcgcggtttggatattgatcagttacctcatgtagttaactat
gaactgccaaacgtaccggaagattacgtgcaccgcattggtcggactggccgcgcggaa
cgtactggtgaagcgatttctttagtttgtgttgatgaacataaactgttgcgtgatatc
gagcgcttactgaaacgtgaaatcccacgcattgcgctggatggctatgagccggacccg
agcattaaagcagatccgattcaaaatggccgtcaaggtcgcggagcacaacgtcctggt
atggggcgtggtagcagtgccggccgcccacaaaatggtggcgcagcagcaggccgtggc
gatagccgcaccagccgcccacgtagccaggctgatggtcaacgccgcccggcaggcccg
tcttcacgtggccgtagtcgtaaaccaggcgaataa
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