KEGG   Yersinia hibernica: D5F51_18290
Entry
D5F51_18290       CDS       T05961                                 
Symbol
traD
Name
(GenBank) conjugative coupling factor TraD, PFGI-1 class
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
yhi  Yersinia hibernica
Brite
KEGG Orthology (KO) [BR:yhi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:yhi02044]
    D5F51_18290 (traD)
Secretion system [BR:yhi02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   D5F51_18290 (traD)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind DUF87
Other DBs
NCBI-ProteinID: QAX80311
UniProt: A0A481QGK3
LinkDB
Position
complement(3861062..3863185)
AA seq 707 aa
MSDRYVMESLLRPAVELYTAGTAWSATYVCLTAPWAVALAPSVSWVTAAGFGVLALKRTR
QGLRILRYRRNIRRLPRYELSSRQIPVSHRYLFLGRGFQWTQKHTQRMLEARRPEAEHYV
QPSVIYRMARDLEKRLEYSLPWLCRLTQTNSLFNPVRPLPPVGGSPLYHGVELNEVDVLY
DLGERVGHTLVIGTTRVGKTRLAEVLVTQDIRRGDVTVMFDPKGDADLLKRMWAEARRAG
REKEFYVFHLGWPDISARYNAIGRFSRISEVASRVAGQLSGEGNSAAFREFAWRFVNIIT
RALVALGQRPDYSLILRYVTNIGELYETYVESLLASRAPHLLDQVDNLLASGMLKDKDLP
RNMQGQANALRVWAIEMTLSSDEGKKLWDPVLDGLRSAVRYDRTYFDKIVASLLPLLEKL
TTGKTAALLAPDYNDMADTRPIFDWQEVIRKKGIVYVGLDALSDSEVASAVGNSMFADLV
SVAGHIYKFGLGDETGGATQKKVPINLHCDEFNELMGDEFIPLINKGGGAGIQVTAYTQT
LSDIEARVGNRAKANQVVGNFNSLIMLRVRENSTAELLTKQLPEVDVYNKTLTSGVTDIS
RPGEGTDFNSSVQDQVTLARMPMITEADIINLPKGQAFALLEGGRLWKIRMPLPGSGNDP
LMPESISQIAQYMQQNYRTGETWWTGSALPSDALPASPLQDAVAAGV
NT seq 2124 nt   +upstreamnt  +downstreamnt
atgagtgatcgttacgtaatggaatcccttttgcgcccggccgtggagctgtacacggcg
ggaacggcctggagtgcgacctacgtttgcctgactgctccctgggctgtcgcgctagct
ccttctgtcagttgggtcaccgcggccggttttggtgtgctggccctcaaacgtacccgc
caggggctgcgtattttacgctaccggcgcaatatcaggcggttgccacgctatgagtta
agcagcaggcagatccccgtgagccaccgttacctgtttctggggcgcggttttcagtgg
acgcaaaagcatacccaacgcatgcttgaggcccgccgtcctgaagcagagcactatgtt
cagccttctgttatctaccgtatggcccgggatttggaaaaacggctggagtacagcctg
ccgtggctgtgccggctgactcagacgaattcacttttcaacccagtgcgtcctttgccg
ccggtgggcggtagccccctttatcatggtgtggaactgaacgaggttgacgtgttgtat
gacctgggcgaacgtgtggggcacacgttggtgatcggcacgacccgtgtgggtaaaacc
cgccttgcggaggtactggtcacacaggatattcgccgtggagatgtcactgtaatgttt
gaccccaagggggatgccgatctgcttaaacgcatgtgggccgaggcgcggagggcgggc
agggaaaaggaattttacgtctttcatctggggtggccggatatcagcgcgcgttataac
gccatcggccgcttcagccgtatctccgaagtcgcctcccgtgtagcggggcagttatcc
ggtgaaggtaactcggcggcgtttcgtgagttcgcctggcgttttgtcaatattatcacc
cgggcactggtcgcgctcggacaacgcccggattacagcctgatcctgcgatatgtaacc
aatattggcgaactctatgagacttacgtggagagcttgctggcatcccgtgcgcctcat
cttctggatcaagtggacaacttattggcatccggcatgctcaaggacaaggatttgcca
cgaaatatgcaggggcaagccaatgcgctgagagtgtgggctattgaaatgacattgagc
tccgatgaagggaaaaaactgtgggatccggtgctggacggcctgcgtagcgccgtccgc
tatgaccggacctattttgataaaatcgtggcgtccctgctgcctctgctcgagaaactg
actaccggcaagaccgctgcgcttctggctccggattacaacgatatggcggatacgcgg
cccatttttgactggcaggaggtgatccgcaagaaggggattgtgtacgtcggcctcgat
gcgctgtcggactcagaagttgcctccgctgtcggaaacagcatgtttgccgacttagta
tcggttgccggccatatctataagttcgggctgggtgatgaaaccggtggggcgacgcag
aagaaagtcccgattaacctgcactgtgacgagtttaatgagctgatgggcgatgagttt
attccgctgattaacaaggggggcggtgcggggatccaggtaacggcttacactcagaca
ctttctgatattgaagcgcgtgtgggcaaccgcgcgaaggccaaccaggttgtgggtaac
tttaactcgctgattatgctgagggtgcgtgagaacagtacggcagagttactgaccaag
cagttacccgaagtggatgtctacaacaaaaccctgacgtccggggtaaccgacatttcc
cgacctggcgagggaaccgattttaacagcagtgtgcaggatcaggtgacgctggccaga
atgccgatgataacggaggccgatattatcaacctgcccaaagggcaggcatttgcgttg
ctggagggcggacgcctgtggaaaatccggatgccgctaccggggagtggcaatgacccc
ctgatgcctgaaagcatcagccagatcgcgcagtacatgcagcagaactaccgcaccggt
gaaacctggtggaccggtagcgccctgccgtctgatgcgctgccggcctcacccctccag
gatgcggttgcggcgggggtataa

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