KEGG   Yimella sp. cx-51: J5M86_09360
Entry
J5M86_09360       CDS       T07124                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
yim  Yimella sp. cx-51
Pathway
yim00230  Purine metabolism
yim00240  Pyrimidine metabolism
yim01100  Metabolic pathways
yim01232  Nucleotide metabolism
Module
yim_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
yim_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:yim00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    J5M86_09360
   00240 Pyrimidine metabolism
    J5M86_09360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:yim03400]
    J5M86_09360
Enzymes [BR:yim01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     J5M86_09360
DNA repair and recombination proteins [BR:yim03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    J5M86_09360
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N Ribonuc_red_lgN MqsR_toxin
Other DBs
NCBI-ProteinID: QTH37117
LinkDB
Position
complement(1960956..1963832)
AA seq 958 aa
MTETTNARAKTRRGGKGVKVERIFTTPGVHPYDEVKWERRDVVQQNWKTGETIFEQRGVE
FPDFWSLNASTIVTTKYFRGALGTDAREVSLKQLIDRVVLTYVKAGKEFGYFASEDDATL
FEHELTWSLLHQVFSFNSPVWFNVGTPSPQQVSACFILAVDDSMDSILNWYKEEGFIFKG
GSGAGLNLSRIRSSKELLSSGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVVLDVDH
PDIEEFIETKAREEDKIRALRDAGFDMDLGGKDITSVQYQNANNSVRVSDEFMRAVEDGK
PFGLRARGTGEVIETVDARELFNKLNKAAWECADPGLQYDDTINAWHTNPETGRITASNP
CSEYMSLDNSSCNLASLNLLKFLKDDDTFDTATFQKVVEMVITAMDISICFADFPTEAIG
KTTVDYRQLGIGYANLGALLMATGHGYESEGGRSLAAAITSLLTGAAYKRSAEIAGVVGP
YAGYARNSDAHKKVMRKHQAANDQVRTLDAMDSDIHRYATKAWAEVVELGEKNGYRNAQA
SVLAPTGTIGFMMDCDTTGIEPDFSLVKFKKLVGGGSMQIVNQTIPRALKKLGYQTEQIE
AIVEHIAENGHVIDAPGLKREHYEVFDCAMGERAISPMGHVRMMAACQPFLSGAISKTVN
LPETATVDEIAEVHLQGWKLGLKAIAIYRDNCKVGQPLSDAKAKEKPVAAEEKVETEKVI
EYRPVRRRLPKRRTSQTTSFAIGGGEGYLTASQYDDGELGEIFLKFGKQGSTLAGVMDAF
SIAVSVGLQYGVPLDTYVEKFTNLRFEPAGLTDDPDVRMAQSIMDYVFRRLALDYMDFET
RSFMGIHSADERARQLETGSYAPNSDEDLEEELETLSQSAATKEPTKEPAKPALQVISGA
GAADAREVSPEVHSSAELMEKFQGKAADAPMCMTCGTKMRPAGSCYVCEGCGSTSGCS
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgacggagacgaccaacgcgcgtgctaagacgcgtcgaggcggtaagggcgtgaaggtg
gagcgcatcttcaccacgcccggagtgcacccgtacgacgaggtcaagtgggaacgccgc
gacgtcgtccagcagaactggaagaccggcgagaccatcttcgagcagcggggtgtcgag
ttccccgacttctggtcgctgaacgcttccaccatcgtcaccacgaagtacttccgtggt
gcgctgggcaccgacgcccgcgaagtgagcctcaagcagctcatcgaccgcgtcgtgctc
acctacgtcaaggccggcaaggagttcggctacttcgcctccgaggacgacgccaccctc
ttcgagcacgagttgacctggtcgctgctgcaccaggtgttcagcttcaactccccggtg
tggttcaacgtcggcaccccgagcccgcagcaggtctccgcctgcttcatcctcgccgtc
gacgactcgatggactccatcctcaactggtacaaggaagagggcttcatcttcaagggc
ggctccggtgccggcctcaacctctcccgtatccgttcctccaaggaattgctctccagc
ggcggcacggccagcggcccggtcagcttcatgcgcggcgccgatgcctccgcaggcacc
atcaagtccggtggcgccacgcgtcgcgcggccaagatggtcgtcctcgacgtcgaccac
cccgacatcgaggagttcatcgagaccaaggcgcgtgaggaagacaagatccgcgccctg
cgcgacgccggtttcgacatggacctcggcggcaaggacatcacctccgtccagtaccag
aacgccaacaactcggtgcgcgtcagcgacgagttcatgcgtgcggtcgaggacggcaag
cccttcgggctgcgtgcccgtggcaccggcgaggtcatcgagaccgtcgacgcccgtgag
ctgttcaacaagctcaacaaggctgcctgggagtgcgccgacccgggtctgcagtacgac
gacacgatcaacgcttggcacaccaaccccgagaccggccgcatcaccgcgtccaacccg
tgctcggagtacatgtcgctcgacaactcctcgtgcaacctcgccagcctcaacctgctg
aagttcctcaaggacgacgacaccttcgacaccgccaccttccagaaggtggtggagatg
gtcatcaccgcgatggacatctcgatctgcttcgccgacttccccaccgaggcgatcggc
aagaccactgtcgactaccgccagctcggcatcggttacgccaacctcggcgcattgctg
atggccaccggtcacggctacgagtccgaaggcggacgcagcctcgccgcggcgatcacc
tcgctgctcaccggcgctgcctacaagcgctcggcagagatcgccggtgtggtcggcccg
tacgccggctatgcccgcaattccgacgcgcacaagaaggtcatgcgcaagcaccaggcc
gccaacgaccaggtgcgcaccctcgacgcgatggactccgacatccaccgctacgccacc
aaggcgtgggccgaggtcgtcgagctcggtgagaagaacggctaccgcaacgcgcaggcc
tcggtgctcgcacccaccggcaccatcggcttcatgatggactgcgacaccaccggtatc
gagcccgacttctcgctggtgaagttcaagaagctcgtcggcggcggctccatgcagatc
gtcaaccagacgattccgcgggcgctgaagaagctgggctaccagaccgagcagatcgag
gcgatcgtcgagcacatcgccgagaacggtcacgtcatcgacgcaccgggcctgaagcgt
gagcactacgaggtgttcgactgcgcgatgggtgagcgtgcgatcagcccgatgggccac
gttcgcatgatggctgcctgccagccgttcctgtcgggcgcgatctccaagacggtcaac
ctgcccgagaccgcgacggtcgacgagatcgccgaggtgcacctgcagggctggaagctg
ggcctgaaggccatcgcgatctaccgcgacaactgcaaggtcggtcagccgctctcggac
gccaaggccaaggagaagccagttgcggcagaggagaaggtcgagacggagaaggtcatc
gagtaccgccccgtccgtcgccgtctgcccaagcgtcgcaccagccagaccacctcgttc
gccatcggcgggggagagggttacctgacggccagtcagtacgacgacggtgaactcggt
gagatcttcctgaagttcggcaagcagggctccacccttgccggcgtcatggatgccttc
tcgatcgcggtctcggtcggcctgcagtacggcgtgccgctcgacacctacgtggagaag
ttcaccaacctgcgcttcgagccggccggcctcaccgatgacccggacgtccgcatggcg
cagtcgatcatggactacgtcttccgccggttggcgctggactacatggacttcgagacc
cgttcgttcatgggcatccacagcgcagacgagcgtgctcgtcagctcgagaccggttcg
tacgcaccgaactccgacgaagacctcgaggaagaactcgagaccctctcgcagtcggcc
gcgaccaaggaaccgaccaaggagccggccaagcctgcgctgcaggtgatctcgggtgcc
ggtgccgccgatgctcgtgaggtctccccggaggtgcactcctcggccgagctgatggag
aagttccagggcaaggctgccgacgcgccgatgtgcatgacctgcggcaccaagatgcgc
ccggccggtagctgctacgtctgcgaaggctgcggaagcacctccggctgcagctga

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