Yersinia intermedia: CH53_1016
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Entry
CH53_1016 CDS
T03608
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
yin
Yersinia intermedia
Pathway
yin00470
D-Amino acid metabolism
yin00550
Peptidoglycan biosynthesis
yin01100
Metabolic pathways
yin01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CH53_1016
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CH53_1016
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CH53_1016
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
CH53_1016
Enzymes [BR:
yin01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CH53_1016
Peptidoglycan biosynthesis and degradation proteins [BR:
yin01011
]
Precursor biosynthesis
Amino acid ligase
CH53_1016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATPgrasp_ST
ATP-grasp
RimK
TTL
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
AJJ21021
LinkDB
All DBs
Position
complement(1152453..1153373)
Genome browser
AA seq
306 aa
AA seq
DB search
MAEKVAVLLGGTSAEREVSLLSGQAVLAGLREAGIDAHGIDTKDFPVTQLKEQGFDKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQASGLPISPYIALNRQ
QFETLSSVELMAGVAKLGLPLIVKPSHEGSSVGMSKVDQADQLHGALEEAFRHDSDVLIE
KWLSGPEYTVAILGDNVLPSIRIQAPGVFYDYEAKYLSDETQYFCPSGLSDELEQQLATL
SLQAYQALGCSGWGRVDVMQDSDGNFYLLEVNTSPGMTSHSLVPMAARQSGLSFSQLVAR
ILTLAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagtcgcagtactgctgggtggtacctccgctgaacgtgaagtgtcattg
ctatcaggtcaggcggtattagcgggcttgagagaagcgggtatcgatgcccatgggata
gataccaaagacttcccagtgactcagcttaaagaacagggctttgataaggtctttatc
gccttacacggtcgtggtggcgaagatggcaccctgcaaggggtgttggagttcctgcaa
ctgccttataccggcagcggcgtgatggcatcagccctgacgatggacaaattacgcacc
aaattggtgtggcaagcctcaggtttaccgatttcaccgtatatcgcgttgaatcgtcaa
cagtttgaaacactttcgtcagtggaattaatggcaggtgtcgctaagcttggcctgcca
ttaattgtgaagccaagccacgaaggctccagtgttggcatgagcaaggttgatcaggcc
gatcaattgcacggtgccttggaagaagccttccgccacgacagtgatgtgctgatagaa
aaatggttgagtggcccggaatataccgtcgcgatcctcggagacaacgttttaccgtca
atccgtattcaggcgcctggtgtgttctatgattatgaagccaagtatctttctgatgag
acacagtatttttgtccaagtggcttaagtgatgagctggaacagcagttagcaacactg
tcattgcaggcttaccaggcgctgggttgcagtggttggggccgggttgatgtcatgcaa
gacagtgacggcaatttctacctacttgaagtgaacacttcaccgggtatgaccagccac
agtttagtgccgatggcagcccgccagtctgggttgagtttctcccagttagtggcgcga
attctgacgttggctgactga
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