Yersinia intermedia: CH53_13
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Entry
CH53_13 CDS
T03608
Name
(GenBank) pseudouridine synthase, RluA family protein
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
yin
Yersinia intermedia
Brite
KEGG Orthology (KO) [BR:
yin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yin03009
]
CH53_13
Enzymes [BR:
yin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CH53_13
Ribosome biogenesis [BR:
yin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH53_13
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AJJ18156
UniProt:
A0A209A4Y3
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All DBs
Position
complement(10177..11139)
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AA seq
320 aa
AA seq
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MKTNNPAVQLITISADEAGQRIDNFLLTKLKGVPKSMIYRIVRKGEVRVNKGRIKPEYKL
ADGDVVRVPPVRVAEREEVQISAKLDKVAALADCILFEDDYLLVLNKPSGTAVHGGSGLS
FGVIEALRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRLKGMQKDYLALV
RGQWQSHCKAVQAPLLKNILQSGERVVKVSSEGKPSETRFKVEERFEHATLVKASPITGR
THQIRVHALHAGHPIAFDDRYGDREFDQQLQGTGLHRLFLHAAALRFEHPNSGETMRIEA
PLDNQLRHCLLMLRKKAAEK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaataatccagcagtacaattaatcaccatttctgccgacgaagctggtcag
cggatcgataactttttgctcactaaattgaaaggtgtgccaaagagtatgatctaccgc
atcgtgcgcaaaggtgaggttcgcgttaataaagggcgcattaagccagaatataaactg
gctgacggtgatgtggttcgtgttccgcccgtgcgtgtcgctgagcgagaagaggttcag
atttctgccaaactggataaagttgcggcgttggccgactgtattttatttgaagatgac
tatttgttagtactgaacaaaccttccggtacggcggttcatggtggcagtggtttgagt
tttggtgttattgaagcattgcgcgcgttacgccccgaagcccgtttccttgaattggtt
catcgccttgaccgcgatacctccggtgttttgttggtggcgaaaaaacgctctgcgctg
cgttctttacatgagcaactgcggttaaaagggatgcagaaagactatttggcattggtg
cgaggccaatggcaatctcactgtaaagcggttcaggcacctttattgaaaaatattctg
caaagtggcgagcgggtggtgaaagtcagcagtgagggcaaaccttcagaaacgcggttt
aaagttgaagagcgttttgagcacgcaaccctggtcaaagccagcccgattactggccgg
acccaccagatccgcgtgcatgcgctccatgcgggccacccgattgcttttgatgatcgc
tacggcgaccgtgaatttgatcaacaattgcaaggcacggggttgcatcgattattttta
catgcggcagcattacgttttgagcaccccaatagcggtgaaaccatgcgtattgaagcg
ccactggacaatcagttacgccactgcctgctgatgttacgcaagaaagcggcagaaaag
taa
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