Yersinia rochesterensis: CH54_3092
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Entry
CH54_3092 CDS
T03609
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr00250
Alanine, aspartate and glutamate metabolism
ykr00410
beta-Alanine metabolism
ykr00430
Taurine and hypotaurine metabolism
ykr00650
Butanoate metabolism
ykr01100
Metabolic pathways
ykr01110
Biosynthesis of secondary metabolites
ykr01120
Microbial metabolism in diverse environments
ykr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CH54_3092
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CH54_3092
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CH54_3092
00430 Taurine and hypotaurine metabolism
CH54_3092
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CH54_3092
Enzymes [BR:
ykr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
CH54_3092
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GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AJJ35129
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All DBs
Position
3354835..3356235
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AA seq
466 aa
AA seq
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MTKKSLDDYRSTLLDSRFGSQAIRHISENKNFPKEEMREDIAFQIISDELFLDGNARQNL
ATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDMRCVNMMADLWNAPTPKGEQGVG
TNTIGSSEACMLGGMAMKWRWRKKREAAGKPTNKPNFVCGPVQVCWHKFARYWDVEIREI
PMVPGQLFMDPQRMIEACDENTIGVVPTFGVTYTGNYEFPKPLHDALDKLQKDTGLDIDM
HIDAASGGFLAPFVAPDIEWDFRLPRVKSISTSGHKFGLAPLGCGWVIWRDAAALPEELI
FNVDYLGGQVGTFAINFSRPAGQVISQYYEFIRLGREGYTKVQSACYQVAEFLAKEIAPL
GPYEFYCSGGPDEGIPAICFRIKEGAKTGYTLYDLSERLRLRGWQVPAFTLSGKMSDVVV
MRIMCRRGFEMDFAGLLLDDFKSSLKYLSEHPSLGGLASQNSFNHT
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaatctctggatgattatcgctctacgttattagattcccgctttggctct
caagccattcgtcatatttcagaaaataaaaattttcctaaagaggagatgcgcgaggat
attgcttttcaaatcataagtgacgagctatttcttgatggtaatgcgcgacagaatctc
gcgacattttgccaaacgtgggacgacgataatgtccacaagttaatggacctttcgata
aataaaaactggattgataaagaggaatatccgcaatcggcggcaatagatatgcgttgt
gtaaacatgatggccgatttgtggaatgcacctacgccaaaaggtgagcaaggggtgggg
acgaataccattggttcttcagaagcttgcatgctgggtggcatggcgatgaagtggcgc
tggcgcaaaaaaagagaagcggcaggtaaacccacgaataagcctaattttgtctgtggg
ccggtacaagtttgttggcataaatttgctcgttattgggatgtcgaaatacgtgaaatt
cctatggttccagggcaattatttatggacccacagcggatgatagaggcatgcgacgaa
aatactattggcgtagtgccgactttcggtgtgacttacacaggtaactatgagtttcct
aaacccttgcatgatgcgctggataagctacaaaaagatactggccttgatattgatatg
catatcgatgcggcgagtggtggctttttagcgccctttgttgcgccggatattgagtgg
gatttccgtttgccacgggtgaaatcaatcagcacttccgggcataaattcggattggca
cctttgggatgtggttgggttatttggcgtgatgcggcagccttacctgaagagcttata
tttaatgtcgattatcttggcggtcaggtcggcacttttgctatcaatttctcgcgcccc
gcagggcaagttatttcccaatattatgaattcatacgcttagggcgtgaaggttatacc
aaggtacaaagtgcctgttatcaggtggcagaattcctagctaaagaaattgcaccactt
gggccttatgagttctattgcagtggtggcccggatgagggtattcccgccatctgtttc
cgtattaaagagggggcaaaaacgggatataccttatatgacctttccgagcgtttgagg
ctacgtggttggcaagttccggcatttaccttgagtggaaagatgtctgatgttgtggtc
atgcgtattatgtgccgccgcggattcgaaatggatttcgccgggctgttattagacgat
tttaaatcttcactgaaatacctaagtgaacatccatcccttgggggcctggcaagtcag
aatagttttaatcatacataa
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