Yersinia rochesterensis: CH54_613
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Entry
CH54_613 CDS
T03609
Name
(GenBank) SIS domain protein
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
ykr
Yersinia rochesterensis
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ykr03000
]
CH54_613
Transcription factors [BR:
ykr03000
]
Prokaryotic type
Helix-turn-helix
Other families
CH54_613
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
HTH_24
MarR
HTH_29
HTH_36
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AJJ37297
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Position
664404..665291
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AA seq
295 aa
AA seq
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MGDSRYMNTLENIQNNLDLLSKSERKVAEVILASPQTAIHSSIATLAKLANVSEPTVNRF
CRRLDTKGFPDFKLHLAQSLANGTPYVNRNVEEDDSVAAYTGKIFESTMASLDMAKNNLD
IAAINRAVDLLTQAKKISFFGLGASAAVAHDAMNKFFRFNIPIIYFDDIVMQRMSCMNSN
EGDVVVLISHTGRTKSLVELAQLARENDATVIAITSRDTPLANEATLPLLLDVPEDTDMY
MPMVSRIAQLTLIDVLATGFTLRRGAKFRDNLKRVKDALKESRFDKNSQQINSGE
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactctcgttatatgaatacgctggaaaatatccaaaataatctggacctcctg
agcaagtcggaaaggaaagtcgccgaggtgatcctcgcttccccacaaactgccatccac
tcaagtattgccacattagccaaattggcgaacgtcagcgaacccacggtaaaccgcttt
tgccgtcgactagacaccaaaggtttccctgattttaaacttcatttggcacaaagtctg
gcaaatggcacaccttatgtgaatcggaacgtcgaagaggatgatagtgtagccgcttac
actgggaaaatatttgaatcgaccatggccagtttggatatggcgaaaaataatttagat
attgccgcgatcaaccgagcagtggatttattgacacaagcgaagaaaatttcgttcttt
ggccttggtgcgtcggccgctgtagcccatgacgcaatgaataaattcttccggtttaat
atcccgataatttatttcgatgatatcgtgatgcaacgcatgagttgcatgaattccaat
gaaggtgatgtggtggtattaatatcacacactgggcggacaaaaagcctcgttgagctg
gcacagctcgcgcgtgaaaacgatgccacagtgattgccattacctcgcgtgatactccg
ctggctaatgaagcaacattacctctgttgctggacgtgccggaagatactgatatgtat
atgccgatggtatcgcgtattgctcaattgaccttaattgatgtcttagcgaccggtttt
actctgcgccgaggggctaaattcagggataacctaaagcgggttaaagatgcattgaaa
gaatctcgcttcgacaaaaactctcaacaaatcaatagtggtgagtaa
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