KEGG   Yarrowia lipolytica: YALI0E22935g
Entry
YALI0E22935g      CDS       T01033                                 
Name
(RefSeq) YALI0E22935p
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
yli  Yarrowia lipolytica
Pathway
yli03082  ATP-dependent chromatin remodeling
yli03083  Polycomb repressive complex
yli04213  Longevity regulating pathway - multiple species
Brite
KEGG Orthology (KO) [BR:yli00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    YALI0E22935g
   03083 Polycomb repressive complex
    YALI0E22935g
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    YALI0E22935g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:yli03036]
    YALI0E22935g
Enzymes [BR:yli01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     YALI0E22935g
Chromosome and associated proteins [BR:yli03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     YALI0E22935g
   HDAC complexes
    Sin3A-HDAC complex
     YALI0E22935g
    BRAF-HDAC complex
     YALI0E22935g
    REST complex
     YALI0E22935g
    SHIP complex
     YALI0E22935g
    MiDAC complex
     YALI0E22935g
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     YALI0E22935g
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    YALI0E22935g
  Chromatin remodeling factors
   NuRD complex
    YALI0E22935g
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 2912919
NCBI-ProteinID: XP_504286
UniProt: Q6C4X6
LinkDB
Position
E:complement(2703629..2705005)
AA seq 458 aa
MVFTQEPFDPITVKPNEKKRVAYFYDSDVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKH
MEIYRAKPATKQEMCQFHTDEYVDFLSRVTPDNMEHFAKEQAKFNVGDDCPVFDGLFEFC
GISGGGSMEGAARLNRGKCDIAINWAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRV
LYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGEFFPGTGELRDIGAGKGKNYAVNFPLRD
GIDDTNYKNVFQPVIKAIMEWYQPTVVVLQCGGDSLSGDRLGCFNLSMQGHANCVNYVKS
FGLPVLVVGGGGYTMRNVSRTWTFETGLLLNKMVGPDIPYNDYYEYYGPDYKLEVRPSNM
QNANSPEYLDKILTQVLVNLGRTKFAPSVQMTDVPRDAPDDGDEEEDSAKAKDTKGGSQM
AIDEQIEHPNEFYDDDNLEGGDAKDINNFKDKDVAMED
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggtatttacgcaagagccgtttgaccccatcacggtcaagcccaacgaaaaaaaacgg
gtggcgtacttctacgactcggatgtcggcaactacgcctacggcgccggccaccccatg
aagccccacagaatacgaatggcccactcgctcatcatgaactacggtctctacaagcac
atggagatctaccgggccaagcctgccaccaagcaggaaatgtgccagttccacacggac
gagtacgtcgatttcctgtcgcgcgtcactccggacaacatggagcactttgctaaggag
caggcaaagttcaacgtcggagacgattgtcccgttttcgacggtctgtttgaattctgc
ggaatttccggcggaggatctatggagggagccgcccggcttaacagaggcaagtgtgat
attgccatcaactgggccggaggactccatcacgcaaagaaatccgaggcgtccggattc
tgctacctcaacgacattgtgctgggcatcatcgagctgctcagataccacccccgagtc
ctgtacattgatatcgacgtgcaccacggagacggagttgaggaggctttttacaccacg
gaccgagtcatgacgtgctcgttccacaagtacggagagtttttccccggtacaggtgag
ctgcgggacatcggagccggaaagggcaaaaactacgcagtcaacttcccgttgcgagac
ggaatcgacgacacaaactacaaaaacgtgttccagcccgtcatcaaggccatcatggag
tggtaccagcccactgtcgttgtcctgcaatgcggtggtgactcgctgtcgggtgaccgt
cttggatgtttcaacctgtccatgcagggtcatgccaactgcgtcaactacgtcaagtcc
tttggtttgccggttctggtggtcggaggaggaggctacacaatgcgaaatgtgtcaagg
acgtggacttttgagaccggtctgcttctcaacaagatggtgggcccggatatcccctac
aacgattactacgaatactacggacccgactataagctcgaggtgcgaccttctaacatg
cagaatgccaactctcccgagtacctggacaagattctcacccaggtgcttgtcaacctt
ggtcgaaccaagtttgcaccttctgtgcagatgaccgatgtgccccgagacgctcctgat
gatggagatgaagaggaggactcggccaaggccaaggacactaagggcggctcccagatg
gccattgacgagcagattgagcaccccaacgagttttacgacgacgataacctcgagggt
ggagatgccaaggacatcaacaacttcaaggacaaggatgtcgccatggaggactaa

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