Yersinia pestis Antiqua (biovar Antiqua): YPA_3918
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Entry
YPA_3918 CDS
T00369
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ypa
Yersinia pestis Antiqua (biovar Antiqua)
Brite
KEGG Orthology (KO) [BR:
ypa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ypa03019
]
YPA_3918
03009 Ribosome biogenesis [BR:
ypa03009
]
YPA_3918
Messenger RNA biogenesis [BR:
ypa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
YPA_3918
Ribosome biogenesis [BR:
ypa03009
]
Eukaryotic type
Pre-60S particles
RNases
YPA_3918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABG15879
UniProt:
A0A0H2YBP7
LinkDB
All DBs
Position
complement(4413356..4414039)
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AA seq
227 aa
AA seq
DB search
MFACHLLATPSSLDISLVATKRTMIHIILLINRLFGCSPGLQIGNIMAENQNNLIWIDLE
MTGLDPERDRIIEIATLVTDANLNILAEGPVLAVHQSAEQLGLMDEWNVRTHTGSGLVER
VKASPFNDRDAELQTIEFLKQWVPAGVSPICGNSVGQDRRFLFRYMPELEAYFHYRYVDV
STLKELARRWKPEILAGFKKQNTHQALDDIRESVAELAYYREHFIQS
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcttgccacctgcttgcaacgccaagttctttggatatatcgctcgttgcgacc
aaaaggactatgatacacattattttattaattaaccgtttgttcggttgctcccccggc
ttacagataggaaatatcatggcagaaaatcaaaataatctgatctggatcgatctggaa
atgaccggtctcgatccagagcgggatcgcattatcgaaatcgctaccttggtcactgat
gcgaatcttaatattctggcagaaggacctgttctggcagtccatcaatctgctgaacag
cttgggctaatggatgagtggaatgttcgtacccatactggtagtggcttggttgagcgg
gtgaaagccagcccctttaatgaccgtgatgctgaattacaaactatcgaattcctaaaa
cagtgggtccccgcgggggtttcacccatttgcggtaacagtgtaggtcaggaccgccgt
ttcctgttccgctacatgccagagcttgaagcgtatttccattaccgctatgtagatgtc
agtacattgaaagagttagcgcgtcgctggaaacctgaaattctggctggttttaaaaag
caaaatacccatcaggcattggatgacattcgtgagtcagtcgccgagcttgcttactat
cgtgagcattttattcaatcttaa
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