Alloyangia pacifica: CEW88_11895
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Entry
CEW88_11895 CDS
T05431
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ypac
Alloyangia pacifica
Pathway
ypac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ypac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CEW88_11895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ypac03400
]
CEW88_11895
Enzymes [BR:
ypac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CEW88_11895
DNA repair and recombination proteins [BR:
ypac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEW88_11895
RecFOR pathway proteins
CEW88_11895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_3
AAA_16
RNA_helicase
AAA_14
AAA_2
TsaE
AAA_33
Rad17
NB-ARC
AAA_17
nSTAND3
AAA_28
AAA_18
NACHT
ABC_tran
AAA_11
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
AWI84323
UniProt:
A0A2U8HEV5
LinkDB
All DBs
Position
1:complement(2471036..2472070)
Genome browser
AA seq
344 aa
AA seq
DB search
MVGSDPTLRPEPLPEDEGRALRPQMLGDFIGQAEARANLRVFIQSARSRGEAMDHTLFHG
PPGLGKTTLAQIMARELGVGFRMTSGPVLAKAGDLAAILTNLEARDVLFIDEIHRLNPAV
EEVLYPAMEDYELDLVIGEGPAARTVRIELQPFTLVGATTRLGLLTTPLRDRFGIPTRLQ
FYTEDELHEIVSRNAVKLGVRAEPEGAREIARRARGTPRIAGRLLRRVVDFAVVEGGGVV
TRELADGALTRLGVDQLGLDGADRRYLTLMAENYSGGPVGIETLSAALSESRDALEEVIE
PYLLQQGLIQRTPRGRMLAQRAWDHLGLPMPRPQGPGQGTLFDG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggtcggttccgatcccaccctacgtcccgagccgctgcccgaggacgagggccgcgcg
ctgcgcccgcagatgctcggcgatttcatcggccaggccgaggcgcgcgccaacctgcgg
gtgttcatccagtcggcccggtcgcgcggcgaggcgatggaccacacgctgttccacggc
ccgcccggcctcggcaagacgacgctggcgcagatcatggcgcgcgagctgggggtcggc
tttcggatgacctccggcccggtgctggccaaggccggggatctggcggcgatcctgacc
aacctcgaggcgcgcgacgtgctcttcatcgacgagatccaccggctcaacccggcggtg
gaggaggtgctctacccggcgatggaggactacgagctcgatctggtgatcggcgaaggg
ccggctgcgcgcaccgtccggatcgagctgcagcccttcacgctggtcggcgcgaccacg
cggcttggcctgctgacaacgccgctgcgcgaccgcttcggcattccgacccggctgcag
ttctacaccgaggacgaattgcacgaaattgtcagccgcaacgccgtgaagttgggggtg
cgggccgagcccgagggcgcgcgcgagatcgcccgccgggcgcgcggcacaccgcgcatt
gccgggcgactgctgcgccgggtggtggattttgccgttgtcgaaggcggcggcgtcgtc
acccgtgagctggccgatggcgcgctgacaaggctcggggtcgaccagctcgggctcgac
ggggcggaccggcgctacctgaccctgatggccgagaattactccggcgggccggtgggc
atcgagacgctctcggctgcgctctcggaaagccgcgacgcgcttgaggaggtgatcgag
ccctacctgctgcagcaggggctgatccagcgcacccctcgcgggcggatgctggcgcag
cgggcctgggatcacctcggcctgccgatgccgcgcccgcagggcccggggcagggcacg
ctcttcgacgggtga
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