KEGG   Alloyangia pacifica: CEW88_13230
Entry
CEW88_13230       CDS       T05431                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ypac  Alloyangia pacifica
Brite
KEGG Orthology (KO) [BR:ypac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ypac03400]
    CEW88_13230
Enzymes [BR:ypac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CEW88_13230
    5.6.2.6  RNA 3'-5' helicase
     CEW88_13230
DNA repair and recombination proteins [BR:ypac03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CEW88_13230
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: AWI85797
UniProt: A0A2U8HIP0
LinkDB
Position
2:52386..54800
AA seq 804 aa
MSALPASLDQWFSARGWSLHPHQRAMLARAGAPALLLIAPTGGGKTLAGFLPTLAELTEA
PRAGLHTLYVSPLKALAADIRRNLLIPIEEAGLPIRVEDRTGDTSSSRKRRQRADPPHIL
LTTPESLALLTSYEDAPRIFAGLQRVVVDEIHALAESKRGDQLMLALARLQTLCQGLRRV
GLSATVEDPQAIARLLARHPDPCEILEADPGPEPDISMLETEAAPPWSGGGAAYAIPAVL
EQVKRHRTTLIFHNTRAQAEIFFHKLWLANEDALPIGIHHGSLDRGQREKVEAAMVRGDL
RAIVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECLAALEAVRARDLDGESRGPGPRDVLCQHILIAACAGPFEAEALYAEMTTAGAYAGLS
QAEFDDCLQFCATGGYALRAYDQWQRLKQREDGLWQLRDPRSAARIRQNIGTIQDTDTLK
VRYRGRGGAPLGEIEEGFAAQLTRGDTFLIGGQIVRYEGLREMVVQVSRDAHSKPKIATF
MGTKFATSTQLSERILRMFQQEDWPGLPEHTADWLRLQREVSRLPQPGRLLIESFAHDGR
EQLVVYGFAGRNAMQTLGLLLTKRMEEEGLAPMGFVATDYAVLIWGLDAVIDPGPLFDLA
ALEAGLEGWLAGNAVMKRTFRASATIAGLIERNIGGQRKTGKQATMSSDILYDTLVKYDP
GHLLLQITREEAMRGLVDFARIREMCQRVEGRIDLVRLERLSPLSAPLFLEPGRVPIRGS
AEARLLEEQVGALLREAGLAQIGA
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtccgccttgcccgcttccctcgaccaatggttctccgcgcgtggctggagcctgcac
ccgcaccagcgcgccatgctggcgcgcgccggtgcgccggcgctgctgctcatcgcgccc
actggcggcggcaagacgctggccggcttcctgccgacgctggccgagctgaccgaggcg
ccgagggccgggctccacacgctctacgtctcgccgctgaaggcgcttgcggcggacatc
cggcgcaacctgctcatccccatcgaggaggcgggcctgccgatccgcgtcgaggaccgc
actggcgacacctcgtcctcgcgcaagcggcggcagcgggccgacccgccgcatatcctg
ctgaccacgcccgagagccttgcgctgctgacctcctacgaggatgcgccgcgcatcttc
gcggggctgcaaagggtggtggtcgacgagatccacgctctcgccgaaagcaagcgcggc
gatcagctgatgctggcgctggcacggctgcagacgctttgccaggggctgcggcgggtc
gggctctcggcgacggtggaggatccgcaggccatcgcccggctgctggcccggcacccg
gacccctgcgagatcctcgaggccgacccggggccggagccggatatctcgatgctcgaa
accgaggccgcgccgccctggtccggcggcggcgcggcctatgcgatcccggcggtgctg
gagcaggtgaagcggcaccgcaccacgctgatcttccacaacacccgggcgcaggccgag
atcttctttcacaagctctggctggccaatgaggacgcgctgccgatcggcatccaccac
ggctcgctcgaccgcggccagcgcgagaaggttgaggccgccatggtgcgcggcgatctg
cgcgccatcgtctgcaccggctcgctcgatctcggcatcgactggggcgatgtcgacctg
gtgatccagatcggcgcgccgaagaacgtaaaacgccttgtgcagcgcatcggccgggcc
aaccaccgatacaacgcgccctccaaggcgctgctggtgcccgccaaccgcttcgaggtg
gtggaatgcctcgcggcgctcgaggcggttcgggcgcgcgatcttgatggcgagagccgg
ggccccggcccgcgcgacgtgctctgccagcatatcctcatcgccgcctgcgccgggccg
ttcgaggcggaggcgctttacgccgagatgaccacggcaggggcctatgccgggctgagc
caggccgagttcgacgattgcctgcagttctgcgccaccggcggctacgcgctgcgggcc
tatgaccagtggcagcggctgaaacagcgcgaggacgggctctggcagctgcgcgatccg
cgttcggcggcgcgcatccggcagaacatcggcaccatccaggacaccgatacgctcaag
gtgcgctaccgcgggcgcggcggtgcgcccctcggcgagatcgaggagggctttgccgca
cagctgacccgtggcgacaccttcctcatcggcgggcagatcgtgcgctacgaggggctg
cgcgagatggtggtgcaggtcagccgcgacgcccacagcaagccgaagatcgccacattc
atgggcaccaagttcgccacctccacccagctttccgagcgcatcctgcggatgttccag
caggaggactggccgggcctgccggagcacaccgccgattggctgcgcctgcagcgcgag
gtctcgcgcctgccccagcccgggcggctgctgatcgagagctttgcgcatgacgggcgc
gagcagctggtggtctacggctttgccgggcgcaacgcgatgcagaccctgggccttctg
ctgaccaagcggatggaggaggaagggctggcgcccatgggcttcgtcgccaccgattac
gccgtgctgatctggggactcgatgcggtgatcgacccgggcccgcttttcgatctcgcg
gcgctggaggcggggcttgagggctggctggcgggcaacgcggtgatgaagcggaccttc
cgggcgtcggccaccatcgccgggctcatcgagcgcaacatcggcggccagcgcaagacc
gggaagcaggcgacgatgtcctcggacatcctttacgatacgctggtgaaatacgacccc
gggcaccttttgctgcaaatcacccgcgaagaggccatgcgcgggctggtggatttcgcc
cgcatccgcgagatgtgccagcgggtcgaggggcggatcgatcttgtccggctcgagcgg
ctctcgccgctctcggcgccgctcttcctcgagccgggccgggtgccaatccgcggcagc
gccgaggcgcggctgctggaagagcaagtcggggcgctccttcgcgaggcggggctggcg
cagatcggcgcatga

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