Yersinia pseudotuberculosis 1: BZ23_248
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Entry
BZ23_248 CDS
T03679
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ypc
Yersinia pseudotuberculosis 1
Brite
KEGG Orthology (KO) [BR:
ypc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ypc03016
]
BZ23_248 (truD)
Enzymes [BR:
ypc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BZ23_248 (truD)
Transfer RNA biogenesis [BR:
ypc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BZ23_248 (truD)
Prokaryotic type
BZ23_248 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AJJ71729
LinkDB
All DBs
Position
308557..309606
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AA seq
349 aa
AA seq
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MDMENLTWLHGKPTASGILKANPEDFVVVEDLGFEPDGEGEHLLVRIRKNGCNTQFVADY
LARFAKLHPRLVSYAGLKDRHAVTEQWFCLHLPGKEAPDLATFELEGCEVLEAVRHKRKL
RIGSLKGNAFTLVLRHITDRQDVEQRLQQIAAQGVPNYFGSQRFGRGGNNLVQARLWANN
EIRVKERSKRSFYLSASRSAMFNLISSHRLAQQLSTTVLEGDALQLSGRGSWFVAQADEL
ATLQQRVTAGELNITAPLPGDSELGTHGEALAFEQACLAEQTELLSLIKHERVEGSRRAV
LLKPQNMISNWWDDVTLELSFWLPAGSFATSVVREIMNQDRADDTDIIE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatatggaaaacctgacctggctacacggtaaacctacggcgagcggtattttaaaa
gcgaatccggaagattttgttgtcgtagaggatttgggatttgaaccggatggggaaggt
gagcatctgctggttcgtattcgtaaaaatggctgcaatacccaattcgttgctgattat
ttggcgcgctttgccaaacttcatccgcggttggtgagttatgcggggttaaaagaccgc
catgcggtcaccgaacagtggttttgtttacacttgccaggaaaagaagcgccagatctg
gccacctttgagctggaagggtgtgaagtattggaagcggtgcggcataaaagaaaatta
cgcattggttcactgaaaggcaatgcgtttaccttagtactgcgccatattacggatcgc
caggatgtggaacaacgtttacagcaaatagccgcccagggcgtacccaactattttggt
agccagcggtttggccgtggtggtaataatctggtgcaggcccgtttatgggcgaataat
gaaattcgggtaaaagaacgcagcaaacgtagcttttatctgtcggccagtcgcagcgcg
atgttcaatctgattagcagtcaccgcttggcgcaacaactgtcgacgacggtactggag
ggtgatgcattacaattatccgggcgtgggagttggtttgttgctcaagcggatgaatta
gccacgttgcaacagcgcgttactgcgggtgaactgaatatcaccgcgcctttaccgggg
gacagtgaactgggtacccacggtgaggcattagcctttgaacaggcgtgtttggcagag
caaactgaattactgtcattgattaagcatgagcgcgttgaaggtagccgccgggcagta
ctgctaaaaccgcagaatatgataagcaactggtgggatgatgtcactcttgagctgagt
ttctggctccctgcggggagctttgcgaccagtgtagtgagggaaataatgaaccaggat
cgggctgatgatacggatattattgagtaa
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