Yersinia pestis CO92 (biovar Orientalis): YPO1113
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Entry
YPO1113 CDS
T00063
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
Pathway
ype00020
Citrate cycle (TCA cycle)
ype00785
Lipoic acid metabolism
ype01100
Metabolic pathways
ype01110
Biosynthesis of secondary metabolites
ype01120
Microbial metabolism in diverse environments
ype01200
Carbon metabolism
ype01210
2-Oxocarboxylic acid metabolism
Module
ype_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ype_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ype00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YPO1113 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YPO1113 (sucA)
Enzymes [BR:
ype01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
YPO1113 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Caps_syn_GfcC_N
Motif
Other DBs
NCBI-ProteinID:
CAL19779
UniProt:
A0A5P8YDE1
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All DBs
Position
1257007..1259814
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AA seq
935 aa
AA seq
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MQNGAMKAWLDSSYLAGANQSYIEQLYEDFLTDPGSVDDSWRSIFQQLPTTGVKPDQLHS
QTREYFRRLAKDSTRYNSSINDPDIDAKQVKVLQLINAFRFRGHQHANLDPLGLWKQESV
PDLDPSYHNLTEADFQNTFNVGSFAIGKETMKLADLYAALKQTYCGSVGAEYMHITNTEE
KRWIQQRIESVVGKPTFSDAEKRRFLSELTAAEGLERYLGAKFPGAKRFSLEGGDSLVTM
LKEMIRHAGKNGTREVVLGMAHRGRLNVLINVLGKKPEDLFDEFAGKHKEHLGTGDVKYH
QGFSSDVETEGGLVHLALAFNPSHLEIVSPVVIGSVRARRDRLDEARSNMVLPITIHGDA
AITGQGVVQETLNMSQARGYEVGGTVRIVINNQIGFTTSNPLDARSTQYCTDIAKMVQAP
IFHVNADDPEAVAFVTRLALDFRNTFKRDVMIDLVCYRRHGHNEADEPSATQPVMYQKIK
KHPTPRKIYADKLIEQNIASLEDATEMVNLYRDALDHGDCVVEEWRPMNLQSFTWSPYLN
HEWDEAYPSKVEMKRLQELARRISSAPEAIEMQSRVAKIYSDRALMASGEKPFDWGGAET
LAYATLVDEGIPIRLSGEDAGRGTFFHRHAVIHNQKNGSVYVPLSNIHSGQGDFQVWDSV
LSEEAVLAFEYGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLL
PHGYEGQGPEHSSARLERYLQLCAEQNMQVCIPSTPAQVYHMIRRQALRGMRRPLIVMSP
KSLLRHPLATSSLDELANGSFLPAIGEIDELDPKGIKRVVMCSGKVYYDLLEQRRKNGQT
DVAIVRIEQLYPFPHQAVQSVLEQYAHVHDFVWCQEEPLNQGAWYCSQHNFREVIPFGAS
LRYAGRPASASPAVGYLSVHQKQQQALVNDALNVE
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacggcgcaatgaaggcctggctggattcctcctatctggcgggcgcgaaccag
tcctacatagagcagctctatgaagactttttaactgatcctggttccgttgatgatagt
tggcgttcaatttttcaacagctaccaacaacgggtgtaaaacctgatcagctccactcc
caaacgcgtgagtatttccgtcgcctggcgaaggattccactcgttataactcctctatc
aatgatcctgatattgatgccaagcaagttaaggtattgcagttaatcaatgccttccgc
ttccgtggccatcagcatgccaatcttgacccactcggtttgtggaagcaggagtctgtt
ccagacctcgatccttcctaccataatctgaccgaagctgacttccagaacaccttcaat
gtcggttcttttgccatcggcaaagaaacgatgaagctggctgatttgtatgccgcgctg
aagcaaacttattgcggttctgtgggtgctgaatatatgcacattaccaacaccgaagaa
aaacgctggattcagcagcgtattgaatcggttgttgggaaaccgacattcagtgatgca
gagaaacgccgtttcttgagtgaactgaccgccgctgaaggtcttgagcgttatttaggc
gcaaaattcccaggcgccaagcgtttctctctggaggggggggattcactggtcaccatg
ctcaaagagatgatccgtcatgccggtaaaaatggcacacgtgaagtcgtcctggggatg
gcccaccgtggccgtttgaacgtattgatcaatgtgctgggtaagaaaccagaagacttg
tttgatgagtttgctggtaagcataaagaacatctcggtactggtgatgttaagtaccac
caaggcttctcttccgatgtcgaaaccgaaggcggtctggtccacttggcactggccttt
aacccatcacatttggaaattgtcagcccggttgttattggttcagtgcgtgcacgtcgc
gatcgcctggatgaagcacgcagtaatatggtgctgccaatcactattcatggtgatgcg
gcgatcaccggccagggcgtggtacaagaaacattgaacatgtcacaggctcgcggctat
gaagtgggcggtactgtacgcattgttatcaacaaccagattggtttcacaacctcgaac
ccactggatgcgcgctcgactcaatactgtactgatattgccaaaatggtacaggcaccg
atttttcacgtgaatgctgatgatcctgaagctgtggcatttgttacccgtctggcgttg
gatttccgtaatacctttaaacgtgacgtgatgatcgatctggtttgttaccgccgtcat
ggccataacgaagccgatgagccaagtgcaacacagcctgtgatgtatcagaaaattaaa
aaacatccgacaccgcgtaaaatctatgctgacaaactgattgagcagaatatcgccagc
ctggaagatgcgacagaaatggtcaacctatatcgtgatgcattagatcacggtgactgt
gtggtggaagagtggcgtccgatgaatttgcagtccttcacttggtcaccgtatttgaac
catgagtgggatgaagcgtatccaagcaaagttgaaatgaaacgcctgcaagagctggcg
cgtcggatcagctctgcgccggaagccattgaaatgcaatctcgggttgcgaagatatac
agtgatcgcgcgttgatggccagcggtgagaagccatttgactgggggggagcggaaaca
ctggcttacgctacattggtagacgagggcattcctattcgtttatctggcgaagatgcg
gggcgtggtactttcttccaccgccatgcggtcatccataatcagaaaaatggttctgtt
tatgtaccactgtcaaatattcacagtggccagggtgatttccaggtttgggactcggtg
ctgtcagaagaggcagtattggcgttcgaatacggctatgccactgcggagccgcgtacc
ctgactatctgggaagcacagtttggtgacttcgcaaatggtgctcaggtggttatcgac
caatttattagttctggtgaacagaaatggggtcggatgtgtggcttagtgatgttgcta
ccacatggctacgaagggcaggggccggaacactcctccgcacgtctggaacgttatttg
cagctttgtgctgaacaaaatatgcaggtgtgtattccatcgacccctgcacaggtttat
cacatgatccgccgtcaggcattacgtggtatgcgccggcctctgattgttatgtcacct
aaatcattactacgccatccattagcgacatcatctctggatgaactggctaatggcagc
ttcttacccgctattggcgaaattgatgagttggatcctaaaggtatcaaacgtgtcgtg
atgtgctcaggcaaagtctactatgacttgctagagcagcgtcgtaaaaatgggcaaaca
gatgtcgccatcgtgcgtattgaacaactgtatccgttcccacatcaggccgttcaatcg
gtgttggaacaatatgcccatgtacacgatttcgtctggtgccaggaagagccacttaac
caaggtgcctggtattgtagccagcataacttccgcgaagtgattccatttggtgcttcc
ttgcgctacgcaggtcgtccagcatcagcttcaccggcagttgggtatctttccgtacac
caaaaacaacaacaagctctggttaatgacgcgctgaatgttgaatag
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