Yersinia pestis CO92 (biovar Orientalis): YPO1951
Help
Entry
YPO1951 CDS
T00063
Symbol
hmsH
Name
(GenBank) haemin storage system, HmsH protein
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
ype
Yersinia pestis CO92 (biovar Orientalis)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_16
TPR_1
TPR_2
Coatomer_E
TPR_11
TPR_6
TPR_7
Motif
Other DBs
NCBI-ProteinID:
CAL20589
UniProt:
Q56939
LinkDB
All DBs
Position
2213406..2215874
Genome browser
AA seq
822 aa
AA seq
DB search
MYNAFTTLLRPLHWHRMTLLALFISGFVVNPAMADTQYDSLIIRARAGDTAPVLDYLQEE
SKAGPLQSGQVDDWLQIAGWAGRDQEVIDVYERYQSSMNISSRGLASAARAYRNEKRWDQ
ALALWQSSLKKDPTNPDLISGMIMTQADAGRGGVVLKQATELAERDPTVQNYMTLSYLNR
ATDRNYDALQASSEAVRLAPTSEEVLKNHLEILQRNRIVEPALRLAKENPNLVSAEHYRQ
LERDAAAEQVRMAVLPTRSETERFDIADKALADYQNLLTRWGKDPEAQADYQRARIDRLG
ALLVRHQTADLIKEYEAMEAEGYKMPDYARRWAASAYIDRRLPEKAAPILSSLYYSDGKT
FRNSDDLLDADDLYYSLNESEQLDKAYQFAVNYSEQTPYQVGVYGLPGKEPNDDWIEGQT
LLVQSLVALNDLPTAQKKLEDLSSTAPANQNLRIALASIYLARDLPRKAEQELKAVESLA
PRSLILERAQAETAMALQEWHQMELLTDDVISRSPEDIPSQELDRQRKVHNMYELRVSGN
RVISSNSPVSGNKDYGVETLLYSPPIAENWRVFGGGSYNNGQFEEGTGISRILRLGGEWT
SRDHWVEGEISNQNYGNGNKVGARLSTWYDLNDHWRVGGQVERLAKDTPLRALKNKVTAN
SASAYVFWKADDKRDAELSVTPSRFSDGNNRWEYEFNGRQRIWTGPYLTADFNLGLAASQ
NSKEDVIYYNPKRDFAYVPAVTLNHIMYRRYKTIWSQQVQLGVGGYWEKNYGNGLVTTAG
YGQRVQWNDVIDTGVAVVYDKRPYDGKREHDVTLSFDLNYRF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcatttacaacactactgcgcccgttgcactggcacagaatgactttatta
gcgctatttatttctggctttgtcgttaatcctgctatggcggatacgcagtatgactca
ttaattattcgtgccagagccggtgatactgcgccagtcttggactatttacaggaagaa
tctaaagcgggtccattgcagagtgggcaggttgatgactggctgcaaattgcaggttgg
gcagggcgcgatcaagaagtgattgatgtttatgaacgatatcaatcttccatgaatatc
tcttccagaggtttggcttctgccgctcgagcttaccgcaacgaaaagcgctgggatcag
gctttggccttgtggcaaagcagcttaaagaaagaccccaccaatcctgatcttatcagc
ggtatgatcatgactcaggctgatgctggacgcggtggggttgttttaaaacaggcaaca
gagttagccgagcgtgatcccacggtacaaaattacatgacgctgtcttatttaaaccgg
gctactgaccgtaattatgatgctttgcaagcctccagcgaagcggtgcgattggcacca
acatctgaagaagtgctcaaaaatcatctcgaaatattacagagaaaccgtattgttgag
ccagcgttacggcttgctaaagagaacccaaatttggtttctgctgagcattatcgccaa
cttgagcgcgatgctgctgcggaacaagttcggatggcggtgttgccaacgcgcagcgaa
accgagcgttttgacatagcggataaggcgttagcggattatcagaatttattgacccgt
tggggcaaagatccagaggcacaggctgactaccaacgcgcacgcattgaccgattaggg
gcgttattggtccgtcatcagacggctgatctgatcaaagagtatgaagcgatggaggct
gagggctataaaatgcctgattatgcccgccgttgggcggcttctgcctatattgaccga
aggttgccggaaaaagcagcgcctatcctctccagcctctattattcagacggtaaaacc
ttccgtaacagcgacgatttgcttgatgccgatgatctttactattcactgaatgaaagc
gaacaacttgataaagcctaccaatttgcggtcaattatagcgagcaaacgccgtatcag
gttggggtttatggcctgccgggcaaagaaccgaatgatgattggattgaaggccaaacg
ctattggttcaatcattggtggcattgaatgatctgcccaccgcacaaaaaaaattggaa
gatttatccagtactgcacccgctaatcagaatttaaggatcgcattagccagtatttat
ctggcccgggatttaccgcgtaaagcggagcaagaattgaaggccgtggaatcattagca
ccacgcagccttattctggaacgtgcgcaggctgaaactgcgatggcgctacaagaatgg
catcagatggagttactgactgatgatgtgattagccgttccccagaagatatcccctct
caagaattagatcgccaacgtaaagtccataacatgtatgaactacgggtgagtggtaac
cgcgttatctcctccaacagcccggtgagcggcaataaagattatggggtcgaaactctc
ctttacagcccacctattgcagagaattggcgcgtatttggtggcggcagttataacaat
gggcagtttgaagaggggacggggattagccggattctgcgcttaggtggtgaatggacc
tcccgtgaccattgggttgaaggggaaatttccaatcagaattatggcaatggcaataaa
gtcggggcccgtttatcaacctggtacgaccttaatgaccactggcgtgtaggggggcag
gttgaacgtttagctaaagacacaccactacgggcactgaagaataaagtgaccgcgaat
agcgcgtctgcttatgttttctggaaagcagatgataagcgtgatgctgaacttagcgtg
acgccgtcgcgtttttctgacggtaacaaccgttgggaatatgaatttaacgggcgtcag
cgtatctggactgggccttacctaacggcagattttaatctggggttggcagccagccaa
aacagtaaagaagatgtgatttactacaacccgaaacgtgattttgcttacgttccggca
gtgactctcaatcacattatgtaccggcggtacaaaaccatctggagccagcaagtccaa
ctgggtgtgggagggtactgggagaaaaattacggtaatggcttggtgaccacggcgggc
tatggccaacgtgttcaatggaatgatgttatcgataccggtgttgctgtggtttatgac
aagcgtccttacgatggtaaacgtgagcacgatgttacgctttctttcgatttaaattat
cgtttttaa
DBGET
integrated database retrieval system