Yersinia pestis Harbin35: CH55_2586
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Entry
CH55_2586 CDS
T03717
Name
(GenBank) RHS repeat-associated core domain protein
Organism
ypj
Yersinia pestis Harbin35
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
RHS
DUF4595
Motif
Other DBs
NCBI-ProteinID:
AJK06488
UniProt:
A0A380PJA4
LinkDB
All DBs
Position
complement(2799345..2803883)
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AA seq
1512 aa
AA seq
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MTVAQSIGTGYGAAGAQSALRQTALGQQSPARTDYQVSNPNVGNIARASDSLLNVAESQQ
FNTLVTAGFGMQAIAAGVAGGYVGAKIGNKLGHGIARALNFNQVATEGESPAHLGHPIAH
QKKDWGVWGAIGGILLGAAAAALVVVTFGTGLVVIAAAAAAAGLIGGIAAATGAALGQYG
DNKGVIAEGSANVFFEGQPVARVGDKIQCSDHPSSPPPMIAEGAKTVFANQKQIARLGHR
TTCDGNINAGCGSLAITQETAYVYEVADSRNPYLRWSAVILSFLPIQKKFEQGFRSLKKP
PNTAVNATHNCPTGSDPVDMVSGDYLQVWPVIDIAGVLPVRLQRTYRSGDYFTVSGCFGH
KWADSWSQHLVVHEDNIDYIDEEGVGLSFFTPENKVQAVNLYNLRYELVGERHGELRVFD
RSTQQTLHFNQQQQQQRYLSAITDRKGNRIDFRYQQGELISVEHSDGYVLEIDSRGRTIH
AVELVTQEKRQKLLQSTFSERGYLVQCQSFQYGTLSHEYDPKGYMVRWRDTDSTDVAVRY
DISGRVVALKTSTGFFADHFIYHDKERYTIYRDGEGGETGYHYNENNLLIKLVDPLGNTT
LTDWDLTQKIKETDALGRITRFIYNERGDLTAVILPDETRTEYEYNPSGVVTAFTSSAGD
SWQYQYDRQGLLRQVTYPSGQTMSFRYGKKGEVLRKIIAEDQVWRYHYDHHGCLSTIIDP
KGNSTAVTLDVLGRLFSHQNALGELTRYTHSDAHASPAGSVTKMVMPDGVEQAIAYDSEK
RIAALTDGAGKTTRYEYGGFDLLTGLIRPDGQRLTFGYDTLTRLNQVTNASGDTYRYTRD
RAGQVISETDFTGRTVHYQYDAVGRRIGARYPDQRLVRWHYSMQDQVLAQQTWHCDALSS
TLVGTVSYGYDGAGRLLSATNADAVVEFDYDEAGQLVAERLNGREVRHQWDALNGTPVAR
QVGELGLTFVYGAQGELTRLQLAGHQPLQLQHDRLGRETVRESAAGFIQACNYTPSGLLA
HQAAGRNSALFQQQLIAPESPALHGSAVNRSWQYDRAYNVVGMDDGRWGKTQYQYDRNDQ
VVRADFGGFLPLQEQFSYDVNQNLREHRCLPRGAQAVLAQASQQQQAGRVVKRGDSQYRY
DAAGRLVEKRSQKDGYRPQLWRYRWNEQDQLSELITPTGARWRYGYDAFGRRIRKLRVVD
TPPLNEMDAPSTGPATASLAGYAYLWSGDQLIEEVPVYADGTVAYEQGIHWLYAPGGLTP
MARYAQGKLHYVVADHLGTPRELLNEQGKVVWASRLSTWGQAELWRQAANEEDRVSCNLR
FAGQYADAESGLHYNRFRYYDGETGQYLCPDPIGLEGGLNPYGYVHNPVSWVDPLGLATC
PMREVNGTKIFGKGQKDGTPGHDQFSEVIANKLAMSGKFKEVYLNRSYNFANGKGISGRR
PDIMAVDMNGKVHAIELASKTDMGRKFPSLRTRNQDAMKNLPSIDRGSVIVLEHQYNSSK
IKNALDNLISGI
NT seq
4539 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcgcacaaagtattggcaccgggtatggcgcggctggcgcgcaatcggcatta
cgtcaaaccgcgctggggcaacagagcccggcgcggacggattatcaggtcagtaatccc
aatgtggggaatatcgcgcgagcgagtgattctctgctgaatgtggcggaaagtcagcag
tttaacactctggtgaccgccggttttgggatgcaggcgattgccgccggggtggccggg
ggatatgtcggtgccaaaatcggcaataagttaggtcacggtattgcccgtgcgcttaat
tttaatcaagtggcgacggaaggagaaagccccgcgcacctgggccatcccattgcccat
cagaaaaaagattggggggtgtggggggccattggcggtattttactgggggcagcggcg
gcggcattggtggtcgtcacctttggtacggggttggtggtgattgccgcggcggcggcc
gcagccgggttaatcggcggtatcgccgccgcgaccggggcggcattaggacaatacggt
gataacaaaggcgtgattgctgaaggctccgccaacgtcttctttgaaggccagccggtg
gcccgggtgggggataagatccaatgcagcgatcaccccagttcaccgccgccgatgatt
gccgagggcgcaaaaaccgtatttgccaaccaaaagcagatcgcgcgtctggggcaccgt
accacctgcgatggcaatatcaatgcgggatgcggttcgctcgccatcacgcaggaaacg
gcttatgtgtatgaagtggcagacagccgtaatccgtatttacgctggtcagcggttatt
ctgagtttcttgccaatacagaaaaaatttgagcaagggtttcgctccttaaaaaagccg
cccaataccgcggtcaacgctacccataactgcccgaccggcagtgatcctgttgatatg
gtctccggcgattaccttcaggtctggcccgtgattgatattgccggtgttttgcctgtc
cggttacagcgtacttatcgttccggcgattatttcacggtctcgggttgctttggtcat
aaatgggcggatagctggtcacaacacttggtcgtgcacgaagacaacattgattacatt
gatgaggaaggggtggggctgagcttctttacgccagagaataaagtccaggccgtcaat
ctgtataacctgcgttatgagttagtgggggagcgtcatggcgaactcagggtttttgac
cggtcaactcagcagacactgcattttaatcaacagcaacaacagcagcgttatttatcg
gctatcaccgaccgcaaagggaaccgaatcgattttcgttaccaacagggggaactgata
tcggtcgagcacagtgacggctatgtgctggagatcgacagccgtggcaggacaatacac
gcggtcgagcttgtcacgcaggagaaaagacaaaagctgttgcagagtacattcagtgag
cgcggttacctcgttcagtgccagagtttccagtatggcacgctgtcgcatgaatatgat
ccgaaggggtatatggtgcgctggcgggatacggatagcacggatgtggctgtccgttat
gatatttcagggcgggtggtggcactaaaaacatcgaccggtttttttgccgaccatttt
atttatcatgacaaagaacgctatacgatctatcgcgatggggaagggggagaaaccggt
tatcactataatgaaaacaatctgctgataaagttagtcgatccgttaggcaataccacc
ctcaccgactgggacttgacccagaaaataaaagaaaccgatgcattagggcgtatcacc
cggtttatttacaatgagcgcggtgatttaaccgccgtgatcctcccggatgaaacccgt
accgaatatgagtataacccgtctggcgtggtcactgcgtttacgtcttcggcgggggat
agctggcaatatcagtatgacaggcagggattgttacgacaggtaacttatccttccggc
cagacgatgtcgtttcgctacggcaagaagggagaagtgctgcgcaagatcatcgcggaa
gatcaggtgtggcgttaccactatgatcaccacggttgtttaagcaccattatcgatccg
aaggggaacagtacagccgtcacactggatgtgctggggcggttattttctcaccaaaac
gccctcggggagctcacccgttacacacacagtgacgcgcatgccagtccggcgggcagc
gtcacaaaaatggtcatgccggatggtgtggagcaggccattgcctatgacagcgagaag
cgtattgccgcgctgaccgatggcgcggggaaaaccacccgttacgaatacgggggtttt
gatttactgaccggcctgatacgcccggacgggcagcggctgaccttcggctatgacaca
ctgacgcgcctgaatcaggtgaccaatgcgtcaggtgacacctatcgttatacccgtgat
cgggccgggcaggtgatcagcgaaaccgattttaccgggcgcacggttcattatcagtat
gatgcggtggggcggcgtatcggggcgcgttacccggatcagcgccttgttcgctggcac
tactcgatgcaggatcaggtgctggcgcagcagacctggcactgcgatgcactgagttcc
acgctggttggcacggtcagctacggttatgacggtgccggtcgtttgctgagcgcgacc
aatgcggatgcggtggtggagtttgattacgacgaggcgggtcagttggttgcggagcgg
ctgaatggccgggaggtgcggcatcagtgggatgcgctaaacggcacccctgttgcccga
caggtgggtgagctggggctgacgtttgtgtacggcgcacagggcgaactgacccggcta
cagctggcgggccatcagccccttcagttgcagcatgaccggttggggcgggagacggta
cgtgaaagcgcggccgggtttattcaggcctgcaattataccccgagcgggctgttggcc
catcaggcggccgggcgtaactcggcattattccagcaacagttgatcgccccggagagc
ccggccttgcacggcagtgcggtcaaccgcagttggcagtatgaccgggcttataacgtg
gtggggatggatgacgggcgttggggtaaaacgcagtaccaatatgaccgcaatgaccag
gtcgttcgcgctgattttggtggttttttgccgttgcaggagcagtttagctacgatgtg
aaccagaacctgcgcgagcatcgctgtttaccgcgtggggcacaggcggttttggcgcag
gcgagccagcaacagcaggcgggccgggtggtgaagcgcggtgacagtcagtaccgttac
gatgctgccgggcgactggtggagaaacgcagccaaaaagacggctaccggccacagctg
tggcgctaccgctggaatgagcaggaccagttatccgaattgatcacgccgacgggggcg
cgctggcgctacggttatgatgcctttgggcgacgtattcgaaaactgcgggtagtggat
accccgccgctcaatgagatggacgctccttccaccggtccggccacggcatcactggcc
ggttacgcgtacctgtggagcggcgaccagttaatcgaagaggtgccggtgtatgccgac
ggcacggtggcgtatgagcaggggatccactggctgtatgcgccgggcggattaacgccg
atggcccgctacgcgcaaggcaaactgcattatgtggtggcggatcatctgggtacgccg
cgggagttgttgaatgagcagggcaaggtggtgtgggcgagccgactgagcacctggggg
caggcggaattatggcgacaggcggcgaatgaggaggatcgggtcagctgtaacctgcgt
tttgcgggtcagtacgcggatgcagaatccgggttgcattacaaccggttccgctactat
gatggcgagacggggcaatatctatgcccggacccgatagggctggaagggggattaaac
ccgtacgggtatgtacataatccggtgagctgggtggatccgctggggctggcaacatgt
ccaatgcgtgaagttaacggaacaaaaatatttggtaaaggccaaaaagatggaactcct
ggtcatgatcagttctctgaagttatagccaataaattagccatgagtggtaagtttaaa
gaggtctatttaaataggtcatataattttgctaatggtaaaggaatctcaggacgacga
cctgacattatggctgttgatatgaatggtaaagttcatgctatagaattggcatctaaa
acagatatgggtagaaaattcccatctctgagaactcgaaaccaagatgcaatgaaaaac
ttaccaagcattgatcggggaagtgttattgtattagaacaccaatataattcttcgaag
attaagaatgcattagataatcttatttctggtatatag
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integrated database retrieval system
