Yersinia pestis KIM10+ (biovar Mediaevalis): y2894
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Entry
y2894 CDS
T00092
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ypk
Yersinia pestis KIM10+ (biovar Mediaevalis)
Pathway
ypk00250
Alanine, aspartate and glutamate metabolism
ypk00310
Lysine degradation
ypk00350
Tyrosine metabolism
ypk00650
Butanoate metabolism
ypk00760
Nicotinate and nicotinamide metabolism
ypk01100
Metabolic pathways
ypk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ypk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
y2894 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
y2894 (gabD)
00310 Lysine degradation
y2894 (gabD)
00350 Tyrosine metabolism
y2894 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
y2894 (gabD)
Enzymes [BR:
ypk01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
y2894 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
y2894 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
y2894 (gabD)
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Motif
Pfam:
Aldedh
DUF2114
Motif
Other DBs
NCBI-ProteinID:
AAM86445
UniProt:
A0A3G5L2A3
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Position
complement(3197783..3199279)
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AA seq
498 aa
AA seq
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MSEYHEKNNALFKSITALDGALFINGEFRKGAGGRLPVENPATGKVIGHLAAATPEEIEE
AVAAARRAFPAWAAERPKARANALHRLGDLIAGDALNMARNMTIEQGKPVNEAQGEILKL
AEICHFYGEEATRVQGDVVPNDPPGFQSLVVREPVGVVGAITPWNYPAELVGWKLCASLA
AGCTLIIKPAELTPYTALAIAEKCLEAGIPAGVVNVLTGKGEQVGQALVEHPQVDKIAFT
GSSAVGLHIQQSCPQVKRLSLELGGNGPMVVTACADVAAAVKGAVRRSFRNCGQVCIAIN
RIYVHRSCYRAFVSKMGVATNGLRLGNGLDDPAADLGAMASVEPLNKTRAHLEDALAKGA
RLVAGGKAPEGVEYAKGHFFRPTVLADCTHQMRVMTEETFGPLVGLAPFDDIDEVISRAN
DTPYGLAAYVYARDLAAIHRLSAALDYGNVAINNVDASMMNAPYGGRKQSGVGYEHGREG
LLEYFNFKHIRLYHGIGD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtatcatgaaaaaaataatgcactcttcaagtcgattaccgcgttagacggc
gctttatttatcaatggtgagttccgcaaaggcgcgggggggcgtctgccagtggaaaac
ccggctaccggcaaagtgatcggtcatctcgcggcggctactccagaggagatcgaagag
gcggttgctgcggcgcgtcgcgcttttcctgcctgggccgccgaacggccaaaggcccga
gcgaatgcgttgcaccgtttgggtgatttgatcgccggcgatgccctgaatatggcgcgg
aacatgaccatcgaacagggcaagccggttaacgaagcgcaaggtgaaatactgaagctc
gccgaaatttgtcatttttatggcgaagaagcgactcgcgtgcaaggtgacgttgtgccg
aatgaccctccgggttttcaaagtcttgtcgtgcgagaaccggttggggtggtgggggcg
attaccccttggaattacccggccgaactggtgggatggaagctgtgcgccagccttgcc
gcaggctgtaccctcattatcaaacctgctgaactgacaccctacacggcgctggccatc
gctgaaaaatgccttgaagcgggtattcctgccggtgtcgtcaatgtgttgacggggaag
ggggaacaggttgggcaggcgctggttgaacatccacaggtcgataaaatagcctttact
ggttccagcgcggtcggtttgcatatccagcaaagttgcccgcaggttaagcggttgtcg
ctcgaactcggcggcaatggtccgatggtggtgaccgcctgcgcagatgtggctgccgca
gttaagggcgcggtgcgtcgtagcttccgcaactgtgggcaggtctgcattgcgatcaat
cgtatttatgtccaccgctcatgctatcgggcgtttgtgagcaaaatgggggtggccacc
aatgggttgcgccttggcaatgggttggacgatccagcggcggacttgggtgcgatggcc
tctgtagagccactgaacaaaacgcgtgcgcaccttgaggatgctctggcaaagggggcg
cgcttggttgcgggggggaaagcaccagagggggtggaatatgccaagggccatttcttc
cgtccgactgtgctggccgactgcacacaccaaatgcgcgtcatgaccgaagagacgttt
ggcccgctggtcggcttagcccctttcgatgatatcgatgaagtgattagtcgagcgaat
gatactccctatgggctggcagcttacgtttatgcacgagatctggcggctatccaccgg
ctgtcagcggcgttggactacggcaatgtggcaatcaataacgtcgatgccagcatgatg
aatgcgccctatggggggcgtaagcaaagtggtgtgggctacgagcatggccgtgagggg
ttgctggagtatttcaatttcaagcacatccgcttgtaccacggtatcggggactaa
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