Yersinia pseudotuberculosis IP 32953 (serotype 1): BZ17_2985
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Entry
BZ17_2985 CDS
T03832
Name
(GenBank) RHS repeat-associated core domain protein
Organism
ypo
Yersinia pseudotuberculosis IP 32953 (serotype 1)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PAAR_motif
DUF6531
RHS
DUF4595
Motif
Other DBs
NCBI-ProteinID:
AJJ55313
UniProt:
Q665A3
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Position
3337446..3342008
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AA seq
1520 aa
AA seq
DB search
MTVAQSIGTGYGAAGAQSALRQTALGQQSPARTDYQVSNPNVGNIARASDSLLNVAESQQ
FNTLVTAGFGMQAIAAGVAVPFTVGLAAGMAGGYVGAKIGNKLGHGIARALNFNQVATEG
ESPAHLGHPIAHQKKDWGVWGAIGGILLGAAAAALVVVTFGTGLVVIAAAAAAAGLIGGI
AAATGAALGQYGDNKGVIAEGSANVFFEGQPVARVGDKIQCSDHPSSPPPMIAEGAKTVF
ANQKQIARLGHRTTCDGNINAGCGSLAITQETAYVYEVADSRNPYLRWSAVILSFLPIQK
KFEQGFRSLKKPPNTAVNATHNCPTGSDPVDMVSGDYLQVWPVIDIAGVLPVRLQRTYRS
GDYFTVSGCFGHKWADSWSQHLVVHEDNIDYIDEEGGGLSFFTPENKVQAVNLYNLRYEL
VGERHGELRVFDRSTQQTLHFNQQQQQQRYLSAITDRKGNRIDFRYQQGELISVEHSDGY
VLEIDSRGRTIHAVELVTQEKRQKLLQSTFSERGYLVQCQSFQYGTLSHEYDPKGYMVRW
RDTDSTDVAVRYDISGRVVALKTSTGFFADHFIYHDKERYTIYRDGEGGETGYHYNENNL
LIKLVDPLGNITLTDWDLTQKIKETDALGRITRFIYNERGDLTAVIHPDETRTEYEYNPS
GVVTAFTSSAGDSWQYQYDRQGLLRQVTYPSGQTMSFRYGKKGEVLRKIIAEDQVWRYHY
DHHGCLSTIIDPKGNSTAVTLDVLGRLFSHQNALGELTRYTHSDAHASPAGSVTKMVMPD
GVEQAIAYDSEKRIAGLTDGAGKTTRYEYGGFDLLTGLIRPDGQRLTFGYDTLTRLNQVT
NASGDTYRYTRDRAGQVISETDFTGRTVHYQYDAVGRRIGARYPDQRLVRWHYSMQDQVL
AQQTWHCDALSSTLVGTVSYGYDRAGRLLSATNADAVVEFDYDEAGQLVAERLNGREVRH
QWDALNGTPVARQVGELGLTFVYGAQGELTRLQLAGHQPLALQHDRLGRETVRESAAGFI
QACNYTPSGLLAHQAAGRNSALFQQQLIAPESPALHGSAVNRSWQYDRAYNVVGMDDGRW
GKTQYQYDRNDQVVRADFGGFLPLQEQFSYDVNQNLREHRCLPRGAQAVLAQASQQQQAG
RVVKRGDSQYRYDAGGRLVEKRSQKDGYRPQLWRYRWNEQDQLSELITPTGARWRYGYDA
FGRRIRKLRVVDTPPLNEMDAPSTGPATASLAGYAYLWSGDQLIEEVPVYADGTVAYEQG
IHWLYAPGGLTPMARYAQGKLHYVVADHLGTPRELLNEQGKVVWASRLSTWGQAELWRQA
ANEEDRVSCNLRFAGQYADAESGLHYNRFRYYDGETGQYLCPDPIGLEGGLNPYGYVHNP
VSWVDPLGLATCPPHPYQGVRDASEYLRSQNVPRDFRKQIIQSFDIETIKVRPATSNEYG
LRYFDNVNALEKGRYIFETFPATRSSLAVKTEWNQMTYFSQFKVTPGVTIIEGKAAAQGV
GLPGGQIQKYISNLDKLTKQ
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcgcacaaagtattggcaccgggtatggcgcggctggcgcgcaatcggcatta
cgtcaaaccgcgctggggcaacagagcccggcgcggacggattatcaggtcagtaatccc
aatgtggggaatatcgcgcgagcgagtgattctctgctgaatgtggcggaaagtcagcag
tttaacactctggtgaccgccggttttgggatgcaggcgattgccgccggggtggccgtt
ccctttaccgtcgggctggccgccgggatggccgggggatatgtcggtgccaaaatcggc
aataagttaggtcacggtattgcccgtgcgcttaattttaatcaagtggcgacggaagga
gaaagccccgcgcacctgggccatcccattgcccatcagaaaaaagattggggggtgtgg
ggggccattggcggtattttactgggggcagcggcggcggcattggtggtcgtcaccttt
ggtacggggttggtggtgattgccgcggcggcggccgcagccggattaatcggcggtatc
gccgccgcgaccggggcggcattaggacaatacggtgataacaaaggcgtgattgctgaa
ggctccgccaacgtcttctttgaaggccagccggtggcccgggtgggggataagatccaa
tgcagcgatcaccccagttcaccgccgccgatgattgccgagggcgcaaaaaccgtgttt
gccaaccaaaagcagatcgcgcgtctggggcaccgtaccacctgcgatggcaatatcaat
gcgggatgcggttcgctcgccatcacgcaggaaacggcttatgtgtatgaagtggcagac
agccgtaatccgtatttacgctggtcagcggttattctgagtttcttgccaatacagaaa
aaatttgagcaagggtttcgctccttaaaaaagccgccgaataccgcggtcaacgctacc
cataactgcccgaccggcagtgatcctgttgatatggtctccggcgattaccttcaggtc
tggcccgtgattgatattgccggtgttttgcctgtccggttacagcgtacttatcgttcc
ggcgattatttcacggtctcgggttgctttggtcataaatgggcggatagctggtcacaa
cacttggtcgtgcacgaagacaacattgattacattgacgaggaagggggggggctgagc
ttctttacgccagagaataaagtccaggccgtcaatctgtataacctgcgttatgagtta
gtgggggagcgtcatggcgaactcagggtttttgaccggtcaactcagcagacactgcat
tttaatcaacagcaacagcagcagcgttatttatcggctatcaccgaccgcaaagggaac
cgaatcgattttcgttaccaacagggggaactgatatcggtcgagcacagtgacggctat
gtgctggagatcgacagccgtggcaggacaatacacgcggtcgagcttgtcacgcaggag
aaaagacaaaagctgttgcagagtacattcagtgagcgcggttacctcgttcagtgccag
agtttccagtatggcacgctgtcgcatgaatatgatccgaaggggtatatggtgcgctgg
cgggatacggatagcacggatgtggctgtccgttatgatatttcagggcgggtggtggca
ctaaaaacatcgaccggtttttttgccgaccattttatttatcatgacaaagaacgctat
acgatctatcgcgatggggaagggggagaaaccggttatcactataatgaaaacaatctg
ctgataaagttagtcgatccgttaggcaatatcaccctcaccgactgggacttgacccag
aaaataaaagaaaccgatgcattagggcgtatcacccggtttatttacaatgagcgcggt
gatttaaccgccgtgatccacccggatgaaacccgtaccgaatatgagtataacccgtct
ggcgtggtcactgcgtttacgtcttcggcgggggatagctggcaatatcagtatgacagg
cagggattgttacgacaggtaacttatccttccggccagacgatgtcgtttcgctacggc
aagaagggagaagtgctgcgcaagatcatcgcggaagatcaggtgtggcgttaccactat
gatcaccacggttgtttaagcaccattatcgatccgaaggggaacagtacagccgtcaca
ctggatgtgctggggcggttattttctcaccaaaacgccctcggggagctcacccgttac
acacacagtgacgcgcatgccagtccggcgggcagcgtcacaaaaatggtcatgccggat
ggtgtggagcaggccattgcctatgacagcgagaagcgtattgccgggctgaccgatggc
gcggggaaaaccacccgttacgaatacggcggttttgatttactgaccggcctgatacgc
ccggacgggcagcggctgaccttcggctatgacacactgacgcgcctgaatcaggtgacc
aatgcgtcaggtgacacctatcgttatacccgtgatcgggccgggcaggtgatcagcgaa
accgattttaccgggcgcacggttcattatcagtatgatgcggtggggcggcgtatcggg
gcgcgttacccggatcagcgccttgttcgctggcactactcgatgcaggatcaggtgctg
gcgcagcagacctggcactgtgatgcactgagttccacgctggttggcacggtcagctac
ggttatgaccgtgccggtcgtttactgagcgcgaccaatgcggatgcggtggtggagttt
gattacgacgaggcgggtcagttggttgcggagcggctgaatggccgggaggtgcggcat
cagtgggatgcgctaaacggcacccctgttgcccgacaggtgggtgagctggggctgacg
tttgtgtacggcgcacagggcgaactgacccggctacagctggcgggccatcagcccctg
gcgttgcagcatgaccgattggggcgagagacggtacgtgaaagcgcggccgggtttatt
caggcctgcaattataccccgagcgggctgttggcccatcaggcggccgggcgtaactcg
gcattattccagcaacagttgatcgccccggagagcccggccttgcacggcagtgcggtc
aaccgcagttggcagtatgaccgggcttataacgtggtggggatggatgacgggcgttgg
ggtaaaacgcagtaccaatatgaccgcaatgaccaggtcgtccgcgctgattttggtggt
tttttgccgttgcaggagcagtttagctacgatgtgaaccagaacctgcgcgagcatcgc
tgtttaccgcgtggggcacaggcggttttggcgcaggcgagccagcaacagcaggcgggc
cgggtggtgaagcgcggtgacagtcagtaccgttacgatgctggcgggcgactggtggag
aaacgcagccaaaaagacggctaccggccacagctgtggcgctaccgctggaatgagcag
gaccagttatccgaattgatcacgccgacgggggcgcgctggcgctacggttatgatgcc
tttgggcgacgtattcgaaaactgcgggtagtggataccccgccgctcaatgagatggac
gctccttccaccggtccggccacggcatcactggccggttacgcgtacctgtggagcggc
gaccagttaatcgaagaggtgccggtgtatgccgacggcacggtggcgtatgagcagggg
atccactggctgtatgcgccgggcggattaacgccgatggcgcgctacgcgcaaggcaaa
ctgcattatgtggtggcggatcatctgggtacgccgcgggagttgttgaatgagcagggc
aaggtggtgtgggcgagccgactgagcacgtgggggcaggcggaattatggcgacaggcg
gcgaatgaggaggatcgggtcagctgtaacctgcgttttgcgggtcagtacgcggatgca
gaatccgggttgcattacaaccggttccgctactatgatggcgagacggggcaatatcta
tgcccggacccgatagggctggaagggggattaaacccgtacgggtatgtacataatccg
gtgagctgggtggatccgctggggctggcaacatgtcctcctcatccatatcaaggtgtt
agagatgcatcagaatatctgagatcacaaaatgtgcctcgtgattttagaaagcaaata
atccagtctttcgatatagaaacaatcaaggtacgccctgcaacatcgaatgaatatggg
ctaaggtactttgataatgttaatgctttggagaaaggaagatatatatttgaaacattt
cctgcaaccagatctagtttggcggttaaaaccgaatggaaccaaatgacttatttttca
caatttaaagtcactccaggtgttaccatcattgaaggaaaggctgctgctcaaggtgtt
ggcttacctggcggtcagatacaaaaatacattagtaacttggataagttaacaaaacaa
tga
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integrated database retrieval system
