KEGG   Yersinia pestis Pestoides F (biovar Antiqua): YPDSF_0546
Entry
YPDSF_0546        CDS       T00505                                 
Name
(GenBank) Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
ypp  Yersinia pestis Pestoides F (biovar Antiqua)
Pathway
ypp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ypp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    YPDSF_0546
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ypp02044]
    YPDSF_0546
Secretion system [BR:ypp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   YPDSF_0546
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6484 Sarcoglycan_1 Adhesin_P1_N CENP-F_leu_zip
Other DBs
NCBI-ProteinID: ABP38957
LinkDB
Position
610447..612795
AA seq 782 aa
MNTTLPTLRFDHSHHKLVVRDSTAAVDVLGFEGHESLSQPFCYDIQFTSADKAIDPATML
MHDASLTLAAPMAEAFGVTVQQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRS
HQNGIYQDMSVPQIVEKILRERHDMRGQDFVFTLAREYPRREQVMQYGEDDLTFIRRLLA
EVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVPPSGMHDSGMESVWDLSSAHQVV
EKSVSTGDYNYRTATADMTAGADITRGDTTTYGEAYHYADNYLTAGSEGREPESESGAFY
ARLRHERYLNNQARFAGVANAAALSPGQELKVTGNDVPAQFGKGVIVTRITSHARRDRSY
EVHFEAIPYSEEYCFRPILINKPKMAGTLPARVTSTTVNDTYGHIDKDGRYRVNLMFDRD
SWEQGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIASVLHDSAHGDH
VTISNYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQPRGEGFE
LRTDSFGALRAEKGIFISADGQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASP
ADLQAQISLLQQNLTELKQAVLLLSAPKGIALSSGEHLQMSASENLIATAGKNADVSVGK
NFFIGVGNTLSVFVRKLGIKLIANQGPITVQAQNDLMELLARKAITITSTEDEIKITAKK
KITLNAGGSYITLDENRIESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTEDPIKRWL
FS
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgaataccactctcccgactcttcggtttgaccatagccaccacaaactggtggtccgc
gacagcaccgccgccgttgatgtgctgggctttgaaggccacgaaagcctgagccagccg
ttctgttacgacatccaattcaccagcgccgacaaggcgattgacccggcgaccatgctg
atgcacgacgcgtcactgacattggcggccccgatggccgaagcttttggcgtgacggtt
cagcagacccagcgggtgatccaaggggtggtgaccggatttaaacgcctgtcggcctcg
aaagaggaatgccgctacgaactgagcctgcaaccgcgcctggccttgttgtcgcgcagc
catcagaacgggatatatcaggacatgtcggtgccgcagattgtggaaaaaattctgcgt
gagcgccatgacatgcgcggtcaggattttgtcttcacgctggcccgcgagtacccacgc
cgcgagcaggtaatgcaatacggcgaggatgacctgacctttatccgccgcctgctggcc
gaggtggggatctggtttcgttttaccgccgatcccaaactcaatattgatgtggtggag
ttttacgacgaccagcgcttctatcagcaaggactgacgctacaggcggtgccgccttcg
gggatgcacgacagcgggatggagtcggtctgggacttgtccagtgctcatcaggtggtt
gaaaaatcggtcagtaccggcgattacaactaccgcaccgcgactgccgatatgacggcc
ggggcagacatcactcggggtgataccaccacctacggcgaagcttatcattacgccgat
aactacctgaccgcaggcagtgaagggcgcgagccggaaagtgaaagcggggccttttat
gcccgtctgcgccatgaacgttacctcaataatcaggcgcgcttcgccggggtggccaat
gcggcggcactgtcaccgggtcaggaactgaaagtcaccggcaacgacgtgccagcacag
tttggcaaaggggtgatagtcacccgcatcaccagccacgcccgccgcgaccgcagctat
gaagtgcattttgaggccatcccttactccgaagagtattgcttccgcccgatcctcatc
aacaagccaaaaatggccggcaccttgcccgcacgggtcaccagcaccacggtgaacgac
acttacggacacatcgacaaagacggccgctaccgtgtcaatctgatgtttgaccgggac
agttgggagcaaggttacgaaagcctgtgggtccgtcaggcccgcccgtatgcgggtgac
agctacggcctgcacctgccgctgctggccggcaccgaagtggcgattgcatttgaggac
ggcaacccggaccggccgtatatcgcctctgtgctgcacgactcggcgcacggcgaccac
gtcaccatcagcaactacaaacgcaacgtactgcgcactccgtcgaacaacaaactgcgc
ctggaggatgaacggggcaaagagcacatcaagctcagcaccgaatacggcggcaaaagc
cagttgaatctggggcatctggtcgataacgagaaacagcctcggggtgagggttttgag
ctgcgcaccgacagttttggtgccttgcgggcagaaaaagggattttcatcagcgctgac
ggccaggcgaaggcacaggggcaggtgctggagatgcaaccggctatcagcctgttgaaa
agtgcgcaggaacagatggaggccatctccgcagatgcacaaaccgccaccgccagtccg
gccgacctgcaggcacaaatcagtttgttacagcaaaatctcactgaactgaaacaagct
gtcctgttactgagtgcgccaaaggggatcgcgttgagtagcggggagcatctgcaaatg
agtgccagcgaaaatctgatagccactgccggtaagaatgcggatgtcagtgtaggtaag
aatttttttatcggtgtgggcaacacgctgagcgtatttgtacgcaagctggggataaag
ttgatagcgaatcagggaccaataacggtacaggcccagaatgatctgatggagttattg
gcgcgtaaagcgatcacgatcaccagcaccgaggatgagataaaaatcaccgccaagaag
aagatcacgctgaatgcgggaggcagttatatcacgctggatgagaaccggatcgagtca
ggaacggcgggggaatatttgaccaaagcagggtattacgggcggttagataaggccaag
ctcccaactgaatttccagccttagccgctaaaactgaagaccccattaaacgttggcta
ttctcttaa

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