Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB0667
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Entry
YPTB0667 CDS
T00195
Symbol
yabN
Name
(GenBank) putative ABC transporter, periplasmic di-oligopeptide/nickel binding protein
KO
K11925
SgrR family transcriptional regulator
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yps03000
]
YPTB0667 (yabN)
Transcription factors [BR:
yps03000
]
Prokaryotic type
Helix-turn-helix
Other families
YPTB0667 (yabN)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SgrR_N
SBP_bac_5
HTH_Crp_2
Sigma70_r4
HTH_Mga
HTH_28
HTH_11
HTH_27
Rrf2
HTH_29
Motif
Other DBs
NCBI-ProteinID:
CAH19907
UniProt:
Q66EM6
LinkDB
All DBs
Position
complement(796557..798218)
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AA seq
553 aa
AA seq
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MSTSRLQQQFIRLWQRYNGQSTETTLQALAEVLNCSRRHVRSLLGKMQHAGWLDWQAEAG
RGKRSQLIFLRSGLALQQQRAEELLEQDHIDQLVQLVGDKKAVRQMLLSQLGRSFRQGKH
ILRVLYYRPLENLLPGTALRRSETHMVRQIFNGLTRINEENGELEPDLSHHWQAITPLHW
RFYLRPAIHFHHGRELEMSDVISSLTRLIPQPLFSHIAEVRSPTPYVIDVYLHSPDHWLP
WLLGSVHAMILPQEWETQPDFHRQPIGTGPYSVIRNHHSQLKIQAFDNYFGFRALIDEVN
IWVLPELSEELVYSGVQLQADDTGKNELESRLEEGCYFLLFDQRSPQACTPEIRRWLCEL
ITPIALLSHADPFYQRYWSPAYGMLPRWHHNRLTTQEPKPEGLNELTLTFYSEHSEFDAI
SQTLTQLLAAQGVTLKIQVLDYTRWYQGDAQSDIWLGSANFYLPLEFSLFATLYEMPLLQ
HCLSEELHQDIESWRNNTLLMADWSQRLVSQHQFHPLFHHWLELYGQHSMRGVRMNTLGW
FDFKSAWFTPPEA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcgcgcctgcaacaacaatttattcgtctctggcaacgctataacggacag
tcaacggaaaccacattgcaggcgctggctgaagtgctgaattgttcacgccgccatgta
cgttctctgctgggcaagatgcagcacgcgggctggctcgattggcaggctgaagctggc
cgaggaaaacgctcacaattgatcttcttgcgttccgggctggcgctgcaacaacaacgg
gctgaagagttgctggagcaggatcatattgatcagttagtccaactggtcggtgataaa
aaagcggtacgccaaatgttgctgtcccagttgggacgtagcttccggcaaggaaaacat
attctgcgggtgctctattaccgcccattggagaacttattacccggcaccgccctacgc
cgctctgaaacccatatggtgcggcaaatttttaacgggctgacacggataaatgaggaa
aatggggaactcgaaccggacttatctcatcactggcaagcgatcacccccttgcattgg
cgcttttatttgcgaccagccattcatttccaccatggccgggaactggaaatgagtgat
gtgattagcagcctgacccgcctgatcccccaacccctgttttctcatattgcggaggtg
cgttcaccgacaccttatgtgattgatgtttatctccattcgccagatcactggttgcca
tggctactgggcagcgttcacgccatgattttgccgcaagagtgggaaactcagcccgat
tttcaccgacagcctattggtaccggcccttattccgtgatccgcaatcatcacagccag
ctgaaaattcaggcattcgataactattttggtttccgggcactgattgatgaggtcaat
atctgggtactcccagaactctccgaagaattggtgtattccggggtgcaattgcaagcc
gacgatacgggtaaaaatgagctggagagccgtttagaggaaggttgctacttcttactg
ttcgaccaacgatcccctcaggcctgcaccccggagatccgccgttggttatgtgaattg
atcacaccgatagcgttactcagccacgccgatcccttctatcaacgttactggtcaccg
gcctatggcatgttgccacgctggcaccataaccgactcaccactcaagagccaaaaccc
gaagggctgaacgagctgacactgacgttttacagcgaacattcagagtttgatgccatc
agccagacactgacccagttattggctgctcagggcgtgacgttaaagatacaagtcttg
gactacacccgctggtatcagggggatgcacaaagcgatatctggctcggcagcgctaac
ttttacttgccactcgaattctcgctatttgccaccctctatgaaatgccgctactacaa
cattgtctgagcgaagaactgcatcaagatattgaatcctggcgcaataataccttactc
atggccgattggagccaacgactggtaagccagcatcaattccatccgctatttcatcat
tggttagaattatacggtcaacacagtatgcggggagtgcgtatgaatacactcggctgg
tttgattttaaatccgcatggtttaccccaccagaggcctag
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