Yersinia pseudotuberculosis IP 32953 (serotype I): YPTB3576
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Entry
YPTB3576 CDS
T00195
Name
(GenBank) conserved hypothetical protein
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
yps
Yersinia pseudotuberculosis IP 32953 (serotype I)
Brite
KEGG Orthology (KO) [BR:
yps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yps03016
]
YPTB3576
Transfer RNA biogenesis [BR:
yps03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
YPTB3576
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
His_biosynth
NMO
NanE
PEP_mutase
Pterin_bind
DUF6207
Motif
Other DBs
NCBI-ProteinID:
CAH22814
UniProt:
Q665E2
LinkDB
All DBs
Position
4257310..4258275
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AA seq
321 aa
AA seq
DB search
MRIGHFQLTNCLIAAPMAGITDRPFRALCHGMGAGMAVSEMLSSNPEVWRTDKSRLRMVH
VDEPGIRNVQIAGNDPDEMAAAARINVASGAQIIDINMGCPAKKVNRKLAGSALLQHPDL
VKQILSAVVNAVDVPVTLKIRTGWSPEHRNCIEIAQLAENCGIQALTIHGRTRSCLFNGE
AEYDSIRAVKQTVSIPVIANGDITDPHKARAVLDYTGADALMIGRAAQGRPWIFREIQHY
LDTGELLPPMPLGEVQRLLDGHIRELHDFYGPGKGFRIARKHVSWYLQEHAPNDQFRRTF
NAIEDASEQLEALEAYFENLA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattggacacttccagcttacaaattgcctgattgccgccccgatggcgggtatc
acagatcgccccttcagagcgctatgtcatggtatgggggctgggatggctgtatctgaa
atgctctcctctaatccagaggtttggcgaacggataagtcgcgtttacgcatggtccat
gttgatgaacccgggattcgtaacgtgcaaattgccggtaacgatccagatgagatggca
gcagccgccagaatcaatgtggcgagtggtgcccaaatcatcgatatcaatatgggatgt
ccagccaagaaagtgaaccgcaaactggcgggttctgcattattgcagcatcctgatctg
gtcaaacagatcctctccgcagtggttaatgcggtagatgtgccggtgacgttgaagatc
cggacgggttggtcaccagaacaccgtaactgtatagaaattgcccaactggccgaaaat
tgtggtatacaagccctgacgattcatggccgaacccgttcttgcctgtttaatggtgag
gcggaatacgacagtattcgagcagttaagcagactgtttccattcccgttatcgcgaat
ggtgacatcactgacccgcataaagccagagcggtactcgactacactggagctgatgct
ctgatgataggccgtgccgctcagggaagaccgtggatcttccgggaaatccagcattat
ctggacactggggaactgctgccaccgatgccacttggcgaagtgcagcgtttgttagac
gggcatatacgggaattgcacgacttttatggtccaggcaagggatttcgtattgcacgt
aagcacgtctcttggtatctccaagagcacgcccctaacgaccagtttcggcgcacattc
aacgccattgaggatgccagcgaacagctggaggcgttggaggcatatttcgaaaatctt
gcgtaa
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