Yersinia rohdei: CH64_1028
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Entry
CH64_1028 CDS
T03610
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
yro
Yersinia rohdei
Pathway
yro02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CH64_1028 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_1028 (msbA)
Enzymes [BR:
yro01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
CH64_1028 (msbA)
Transporters [BR:
yro02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CH64_1028 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
DEAD
RsgA_GTPase
AAA_16
AAA_22
AAA_29
nSTAND3
ABC_membrane_2
MMR_HSR1
APS_kinase
AAA_18
AAA_21
AAA_25
6PF2K
AAA_15
DUF87
SLFN-g3_helicase
SRP54
AAA_24
DUF5906
AAA_7
AAA_30
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
AJJ09381
LinkDB
All DBs
Position
complement(1124499..1126247)
Genome browser
AA seq
582 aa
AA seq
DB search
MMNDKDLSTWQTFRRLWPMISPFKTGLAVAAVALVLNAASDTFMLSLLKPLLDDGFGKAN
SSILKWMPLAVIGLMVVRGITGFISSYCISWVSGKVVMHIRRRLFRHMMGMPVSFFDQQS
TGTLLSRITYDSEQVAASSSGALVTVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSI
SIRLVSKRFRNISKNMQSTMGEVTTSAEQMLKGHKEVLIFGGQKVETERFEAVSNRMRQQ
GMKLVSASSISDPIIQLIASFALAFVLYAASFPSVMETLTAGTITVVFSAMIALMRPLKS
LTNVNAQFQRGMAACQTLFTILDMEQEKDEGKLDVDRAKGDIEFRHVTFYYPGKDIPALN
DINMHIEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILMDGHDLREYRLGALRNQVA
LVSQNVHLFNDTVANNIAYARDEHYSRAQIEEAARMAYAMDFINKMENGLDTVIGENGVM
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQAALDQLQKNRTSLVIAHRLS
TIEKADEILVIEDGRIVERGVHAELLAKKGAYAQLNRMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataaagatctatccacttggcagacgtttcgtcgcctctggccaatgatc
tctccttttaagaccggtcttgcggttgcggcggtagcattagtccttaatgccgccagt
gacacctttatgttgtcattattgaaaccattattggacgatggttttggtaaagcgaac
agctcaattttaaaatggatgcctctggccgtgatcggcttgatggtggttcgtggtatt
accggttttatttcgagctattgcatttcatgggtctccggcaaagttgtgatgcatatc
cgtcgtaggttatttagacatatgatgggaatgccagtttccttttttgaccagcaatct
accgggacgctgttgtcacgcataacctatgactcagagcaagtcgcggcatcttcttcc
ggcgcattggtaaccgtcgtgcgagaaggtgcttcaattatcggcttgtttatcatgatg
ttttattacagctggcaattgtcgctgattttaatcgtcatcgcgcccatcgtttcaatt
tctatcagattagtttctaagcgttttcgaaatatcagtaaaaatatgcaaagcactatg
ggtgaagttaccaccagtgcagagcaaatgctgaaagggcataaagaagttttgatcttt
ggtggccagaaagttgaaaccgagcgctttgaggcagtgagtaatcgcatgcgtcaacag
gggatgaaactggtttctgcctcttccatttcagatcccattattcagttaattgcctca
tttgccttggcatttgtgctctatgctgccagcttcccaagtgtgatggaaacgctgact
gccggtactattactgtcgtattctccgccatgattgctttgatgcgcccattgaaatca
ttgactaatgtgaatgcgcagttccagcgcggtatggcagcttgccaaacgttattcact
attctggatatggaacaggaaaaagacgaaggcaaattggacgttgatcgcgcgaaaggt
gacatagaattccgccatgtgacgttttactatccgggcaaagatatccctgcactgaac
gatatcaatatgcatattgaggcaggtaaaaccgtggcattggtcgggcgttcgggttca
ggtaagtcaactatcgccaacttactcacccgtttttacgatgtaagtgaaggcagcata
ttaatggatggccatgacttgcgcgaatatcgactgggtgccttacgtaatcaggtggcg
ttggtctcgcaaaatgttcatctgtttaatgacaccgttgctaataacatcgcttatgct
cgcgatgagcattacagccgggcccaaattgaagaagctgcccgaatggcgtacgccatg
gactttattaataaaatggaaaatggcctggacactgttattggtgaaaatggcgtaatg
ctttctggtggccaacgtcagcgtattgctattgcgcgtgctttattgcgagattgccca
atattgattctggatgaagcaacctcggcactggatactgaatctgagcgggctattcaa
gcagctttggatcagttgcagaaaaaccggacttcactggttattgcccatcgtttgtct
accattgaaaaagcggatgagatcctggtgattgaagatgggcgaattgtcgaacgcggt
gtccacgcagaattactggcgaaaaagggcgcttatgcccaacttaaccgtatgcagttt
ggccaatga
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