Yersinia rohdei: CH64_544
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Entry
CH64_544 CDS
T03610
Name
(GenBank) type I secretion system ATPase family protein
KO
K12530
ATP-binding cassette, subfamily B, bacterial RtxB
Organism
yro
Yersinia rohdei
Pathway
yro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CH64_544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yro02000
]
CH64_544
02044 Secretion system [BR:
yro02044
]
CH64_544
Transporters [BR:
yro02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CH64_544
Secretion system [BR:
yro02044
]
Type I secretion system
RTX toxin transporter
CH64_544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
AAA_22
AAA_18
DUF87
AAA_33
AAA_21
ABC_ATPase
SLFN-g3_helicase
DEAD
AAA_5
AAA_30
nSTAND3
AAA_29
Cytidylate_kin
PRK
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AJJ10129
LinkDB
All DBs
Position
603693..605819
Genome browser
AA seq
708 aa
AA seq
DB search
MENHVHSSLVCAARLLSLAGFSAEPVKVFRQNTPIDMSTMVTFRLLQQHLSQLSRSTPTR
FTVRKQQLNKIKAEQLPLAFRDMQGRFILLARLNDEQALLQYADSQQPKIVSHQELSALW
SGVVFVCRHSRFDIRWFIPVLLRHRKSLTQVLILSLMLQFLALISPLFFQVIMDKVLVHN
AMTTLDVLILVLLVTGIYEVVLKFLREYIFTHTTTRVDILLGGKLFNHLIKLPLSYFKQR
HVGNIVARVRELDNIRDFITGSALTLCVDVVFTLILFIVMWCISPLLTLIVLGSLPLYLL
LAALSTRPLQKKVSRLCGCAAQNGAFLTETLSGVETVKSLALEPQMQQRWEIQTRDYAQA
NFRVQNLQNFSSQSAQLLQKLAGALVIVIGAYQVMSVQLSIGQLIAFNMLATQALMPMSK
LVDLWQQSVRAQVGLTLIADILSLPMEQAATTAPMDSPIRGDIVLKNVIFRYRPDLEPVL
RDFSLSLRAGEHIGLVGPSGSGKSTVARLLQRLYIAEQGIISIDACPISHFSPKGLRRQV
GVVMQENHLFNRTVRENIAYTRPTASLSEVVDAAVLAGAHAFILALPLGYDTVLSEGGAS
LSGGQRQRIAIARTLLANPRVLIFDEATSALDDESQAEVQKNMARIIANRTVMTIAHRLS
TVRHCHRIAVITQGQVTELASHEQLLAQNGIYAQLWRQQADFSYGESR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccacgttcattcctctttggtttgtgctgcccgattacttagtttagcgggt
tttagtgctgagccggtaaaagtctttaggcagaatacccccattgatatgtcgacaatg
gtcaccttcaggttattacaacagcatttatcccaattatcacgttccacacccacgcgg
tttaccgtcagaaaacagcaattaaataaaattaaagcggaacaactgccgctggcattt
cgggatatgcaagggcgctttatcttattggcccgattaaatgatgaacaggctttgctg
cagtacgccgacagccagcaacccaagatagtcagccatcaggagctaagcgccttatgg
agcggagtggttttcgtctgtcgccattcgcgctttgatattcgctggtttattccggtg
ttactccgtcaccgaaaatcactgactcaggtgctgatattgtccttaatgctacagttt
ttggccctgatatcgccgctgttctttcaagtgattatggataaagtattagttcataat
gcaatgaccacgcttgatgtattaattctcgtattattagtgacgggaatatacgaggtg
gtgttgaaattcttgcgtgaatatatttttacgcacaccaccaccagggtggatattctc
ttgggtgggaagttatttaaccatttaattaaattgccactaagttattttaagcaacgg
catgtcggcaatattgtcgccagagtgcgggaattagataatatccgtgattttattacc
ggctcggccctgacattatgtgtcgatgtggtctttaccctgattttatttattgtgatg
tggtgcatatcgccactgctaaccttgattgtgttgggcagtttaccgctttatctgtta
ttagccgcactgagcactcggccactgcaaaaaaaagtcagccggttgtgtggttgcgcg
gcgcaaaatggcgcatttcttaccgaaaccctctcgggtgttgaaacagtaaaaagcctg
gcactggaaccgcagatgcagcagcgctgggagatacaaacgcgcgattacgcccaggca
aattttcgggtgcaaaatctgcaaaatttcagcagccaaagtgcccagttgctacaaaaa
ctggccggtgcgctggtgattgtcattggggcgtatcaagtgatgtcggtacagctcagc
atcgggcaactgattgcctttaacatgttggcaacacaggcattaatgccgatgagtaag
ctggtggatttatggcaacagagtgtgcgggcgcaggtcgggctgacactgattgccgac
attttgagcttgccgatggaacaggcggccaccactgcgccaatggatagccctattcgc
ggtgatatcgtgttgaaaaatgtcatttttcgctatcgtcctgaccttgagccggtgctg
cgcgatttctcattatcactgcgtgcaggggagcacatcggcttggtggggccgtcaggt
tctggcaaaagcaccgtagcgcggttattgcagcgcctgtatatcgccgaacagggcatt
atcagtattgatgcttgccccattagtcatttctcccctaaaggtttgcggcggcaagtt
ggggtggtgatgcaagaaaatcatctgtttaaccgcacggtgcgagaaaatattgcttat
acccggcccactgcgtctctcagtgaggtggttgatgccgcggtgctggcgggcgctcac
gcctttattctcgcgctgccgttggggtatgacaccgtgctgtcagagggcggtgcctct
ctttccggcgggcaacgccaacgtatcgctattgcccgcacattgctggctaatccccgg
gtattgatttttgatgaggcgaccagcgccttagatgatgaatcacaagctgaagtgcag
aagaatatggcgcgcattattgccaatcgcaccgtgatgactattgcccaccgtctttca
actgtgcggcattgccaccgcattgcggtcatcacgcaagggcaggtcaccgagcttgcc
agccatgagcagttgttggcacaaaacggaatttatgcccagctgtggcgacaacaggct
gattttagctacggggaatcaagatga
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