Yersinia ruckeri YRB: BD65_111
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Entry
BD65_111 CDS
T03611
Name
(GenBank) helix-turn-helix domain protein
KO
K07506
AraC family transcriptional regulator
Organism
yru
Yersinia ruckeri YRB
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yru03000
]
BD65_111
Transcription factors [BR:
yru03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BD65_111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AJI94670
LinkDB
All DBs
Position
124022..124900
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AA seq
292 aa
AA seq
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MKSANYKAFDTLRGHKAQLQNSVRLGSGIQLAAWTNSRDCVTLDNPDHHTLSLYIADGYE
CYHKTAGGWKNGGGPDRFCIMPKDSYSSWDVRTDLSFVHLYCTDEHLHELAEKVWDRSPT
SLQVDERVFADDKQITLLYRQFLLSCDWQDRANQLTLSSASTLLLTHMLRHYTQLQWALP
PVTGGLSPSVLNRVKDYIDSQLSESLLLSDLAAQAQLSEFHFARMFKQSTGLAPHQYVMK
LRLEKAQSLLRYGTLPLIDIALVCGFSSASHFSHRFKSTFGYTASALRQEYR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatccgctaattataaggctttcgataccctgagaggccataaggcacagttgcaa
aactcggtgcggttagggtcgggcattcaactggcggcctggacgaacagtagggattgc
gtgacgttagataatcccgaccatcataccctgagtttatacatagccgatggttatgag
tgttaccacaaaacggcgggaggatggaaaaacggtggtggaccggatcggttttgtatc
atgccaaaagacagttattccagttgggatgtgcgcaccgatctctcatttgtgcatttg
tactgtactgatgagcatttgcacgaactggctgagaaagtttgggatcgcagcccgaca
tcactacaagttgatgagcgggtatttgccgacgataaacaaatcacgctgctatatcga
cagtttttactgagttgtgactggcaggaccgtgccaatcaattaaccttaagcagtgcc
agtaccttattgctaactcacatgttacgccattacacacagttacaatgggcattgccg
ccggtcactggcggcttgtcacccagtgtattgaatcgggtgaaagactatatagacagt
cagctttcggaatctttgctactatccgatttggccgcgcaggcacagttaagcgaattt
catttcgcccgtatgtttaaacagagcaccggtctggctcctcatcaatatgtgatgaaa
ttacggctggaaaaggcgcagtcgctactgcgctatggaacattaccgttgatcgatatt
gcgctggtttgcggtttcagttcagccagccatttcagtcaccgtttcaaaagtaccttt
ggctataccgcttcggcgttacggcaggaataccgctga
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