Yersinia ruckeri YRB: BD65_725
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Entry
BD65_725 CDS
T03611
Name
(GenBank) glycosyl hydrolases 2 family protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
yru
Yersinia ruckeri YRB
Pathway
yru00052
Galactose metabolism
yru00511
Other glycan degradation
yru00600
Sphingolipid metabolism
yru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
BD65_725
09103 Lipid metabolism
00600 Sphingolipid metabolism
BD65_725
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
BD65_725
Enzymes [BR:
yru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
BD65_725
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2_N
Bgal_small_N
LacZ_4
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
AJI94507
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All DBs
Position
783264..786374
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AA seq
1036 aa
AA seq
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MSLATVLARRDWENSGITQYNRLDTHPPFQSWRDINQARHDMASSRVRTLNGNWNFSYFG
QPEAVPSCWVTNDLPDAALLPVPANWQLFGYDCPIYTNVQYPIPVNPPYVPTENPTGCYS
TEFTLSPDWHSSGQTRIIFDGVSSAFYLWCNGQWVGYSQDSRLPAEFDLTPYLNSGKNRL
AVMVLRWSDGSYLEDQDMWRMSGIFRDVTLLHKPDIHLCDVHIQTLLSPGFHSAELTVMA
AINLPTFAPPNSVDYSVEVQLWLNNQLVTWQQQPLGSDIIDERGTYSDRTTLTLRVDSPE
LWNAEVPTLYRVVVALRSSQHSLIEAEAYDVGFRQIEIERGLLKINGKPILIRGVNRHEH
HPETGQTIDESTMRQDILLMKQHNFNAVRCSHYPNHPMWYRLCDRLGLYVVDEANIETHG
MKPMGQLANDPRWFGAFSERVTRMVQRDRNHACIIIWSLGNESGHGSSHDALYAWVKSND
PTRPVQYEGGGANTKATDILCPMYARVDKDQPFPAVPKWSIKKWISLPEESRPLILCEYA
HAMGNSFGGFDRYWKAFRQYPRLQGGFVWDWVDQSLTQYDMHNQPFWAYGGDFGDIPNDR
QFCMNGLVFPDRSPHPSLYEAQRAQQFFQFSLSGTEPLMVEITSEFLFRHTDNERLHWQL
AVDGQHLCSGEIALNMPPEGSQKIQLIDQLPAITIQGELWLTVEIRQPKETPWSEANHRT
AWQQWQLPTMLPKAIQIKQAPLQTLTRPTLRHTEQHMIVDHQGQSWLFHRQSGLLEQWFY
QEIPLLLSPLREQFIRAPLDNDIGISEATHIDPNAWVERWKKAGMYNLNQRCLSIQADEI
SSGVQIVAEYSHESEQHCLLKSRWVYHIDSNGKILIDVTVTVASGSPAPARIGMCCQLNQ
VAPQVSWLGLGPHENYPDRQLSALFDYWSLPLDALHTPYTFPGENGLRCNTRKLHYGNWQ
LSGLFNFSISRYSLQQLMDTTHQHLLKPEAGTWLNIDGFHMGVGGDDSWSPSVDADYLLT
AGQYHYQVCWQFSEFD
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
gtgtcattagcgacagtgttggctcgacgcgactgggagaattcggggataacacaatat
aaccgtttagatacacatccccctttccagagttggcgcgatatcaatcaagctcgtcac
gatatggcctcatcccgcgtgagaacgttgaatggaaattggaatttcagctattttggc
cagcctgaagctgtcccctcctgttgggttacgaacgatctacctgatgcagcgctcttg
cccgtacctgcaaactggcaactattcggttacgactgtccaatttacaccaatgttcaa
tatcctattccagttaatccaccttacgttcctactgaaaacccgactggctgctactct
acggaattcactctcagtccagattggcattcatctgggcaaacccgcattatttttgat
ggcgtaagttctgcgttttatctgtggtgcaacggccaatgggtgggatattcccaagac
agccgcttgcctgctgagtttgacctcactccttacttgaattctggcaagaaccgtctt
gcagtaatggtattacgctggagtgacggcagttatcttgaggatcaagatatgtggcgt
atgagcggaattttccgcgatgtcactttattacataaacctgatattcatctgtgtgat
gttcatatccagactctcctctcacccggttttcattctgctgaattaacagtaatggcc
gcaattaatcttccaacctttgctcctccaaattcggtagactattcagttgaagttcag
ctatggctgaataaccaacttgttacatggcaacagcagcctctgggaagtgacattatt
gatgaacgaggaacctactccgaccgcacaacattaacactcagagttgattctcctgag
ctgtggaacgcagaggttcccacgctgtacagagtggtggtcgcgttaagatcttcacag
cactcgctgattgaagcggaagcctacgatgtaggattccgacagattgaaattgaacgg
ggcctgctcaaaatcaatggaaaacctattctgattcgcggagttaatcgccacgaacac
cacccagaaacaggccaaaccattgatgaatcgacaatgcgtcaggatattctattaatg
aagcagcacaactttaatgccgtgcgctgctctcactatcccaatcatcctatgtggtat
cgcttatgcgatcgcttgggattgtatgtggttgatgaagccaatattgaaactcacgga
atgaaaccaatggggcaactggccaatgacccgcgatggttcggtgccttcagtgagcga
gtcacgcgcatggttcaacgcgatcgtaatcatgcctgtatcattatctggtcattaggt
aacgaatcaggccatggttcgagccatgatgctttatatgcctgggtaaaatccaatgac
ccgacccggccagtgcaatatgaaggaggaggagccaatactaaagctaccgatattctt
tgccctatgtatgcccgagttgacaaagaccaaccattccctgccgtacctaagtggtca
ataaaaaaatggatcagtcttcctgaagagtcccgtccattaatactgtgcgaatatgcc
catgcgatgggaaacagctttggaggctttgatcgctactggaaagcgtttcgtcaatac
ccgcgtctgcaaggtggatttgtttgggattgggttgatcaaagcctgacccaatacgat
atgcataaccaaccattttgggcctacggtggggattttggcgatatacctaatgatcga
caattttgcatgaatggtctggtattccctgatcgtagtcctcaccctagcctgtatgaa
gcccagcgagcacagcaattctttcaattttcgcttagcggcacagagccgctaatggta
gaaatcaccagcgaatttttattccgtcacactgataacgaacgcctgcattggcaactc
gctgtcgatgggcaacacctttgttcaggtgaaattgcactcaatatgccaccagaaggt
agtcagaagattcaactaatcgaccagctaccagccatcacaatacaaggtgagctgtgg
ctgacggttgagattcgtcagcctaaggaaacaccttggtcggaggcaaaccatcgaaca
gcctggcagcagtggcaactgccaaccatgctaccgaaggcaatccagataaagcaagcg
cctctacagacgttaacacgtccaaccctgagacatactgaacagcatatgattgttgat
catcaaggtcagagttggctatttcaccgccagagcggcttgttggaacaatggttttat
caggaaatccctttattactcagcccactgcgagagcagtttattcgtgcacctcttgat
aacgatattggtattagtgaggctacgcacattgatcccaatgcctgggttgaacgctgg
aaaaaagcaggtatgtataacctgaatcagcgttgtctatcgatacaggccgatgaaatc
agcagcggagtgcaaattgtagctgagtacagccacgaatcagaacaacactgtttactg
aaaagcagatgggtgtatcatattgattcaaatggaaaaatattgattgatgtaactgta
actgttgcatcaggttcacctgcacctgctcgtattggtatgtgttgccagctaaatcag
gtggcacctcaggtcagttggttaggcctcggtccgcatgagaattacccagaccgccag
ttatctgcgctgtttgattattggtctctgcctttggacgccttacatactccctacact
tttccgggggaaaatggactgcgatgtaatactcgtaagcttcattacggtaactggcag
ctttcaggcttattcaatttttcaataagtcgctacagtttacagcagttgatggatacc
actcatcaacacttattgaaacctgaagcgggtacctggctaaatatcgatggttttcat
atgggtgtcggcggggatgattcgtggagtccaagtgttgatgcagactatttacttaca
gcgggacagtaccattatcaggtatgttggcaattcagtgagttcgattag
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