Zonotrichia albicollis (white-throated sparrow): 102061322
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Entry
102061322 CDS
T07911
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain isoform X2
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102061322 (COL5A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zab00536
]
102061322 (COL5A2)
Glycosaminoglycan binding proteins [BR:
zab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102061322 (COL5A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
102061322
NCBI-ProteinID:
XP_005487005
Ensembl:
ENSZALG00000014589
UniProt:
A0A8D2N8H9
LinkDB
All DBs
Position
Unknown
AA seq
1496 aa
AA seq
DB search
MMAVLVQTRTFFILAALLGRFVTIKAQEVEEYEGGEDGEEIACTQNGQMYLNRDIWKPSP
CQICVCDNGAILCDEIQCQDLLECENPQVPPGECCPVCPHTPRDFDPTIGRGRKGQKGEP
GIVPPVSGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGH
PTHPGPDGISRPFSAQMAGLDEKSGLGSQMGLMPGAVGPVGPRGPQGLQGKQGGAGPTGP
PGEPGDPGPMGPVGSRGPEGPPGKPGEDGEPGRPGQTGEPGFPGSPGPRGFPGAPGLPGL
KGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGPTGPLGPRGIPGERGRIGPQGAPGGRGQ
HGMPGKPGPMGPLGITGSPGFPGIPGIKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGL
PGAEGTDGSPGAKGPTGSPGTGGPPGLSGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGE
AGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGP
KGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGR
PGPAGSIGIRGQPGSMGLPGPKGGSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP
PGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGE
RGEPGASGLQGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGD
RGGVGEKGAEGTAGNDGARGLPGPIGPMGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGE
NGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSHGPPGPPGVPGLKGG
RGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGP
TGPPGGPGDKGDPGDDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK
QGPTGPPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGL
PGSPGGPGTPGPVGPPGDAGQRGETGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGD
RGQKGHRGFTGLQGLPGPPGPVGEQGSPGIPGPFGPRGPPGPVGPSGKDGSPGPLGPTGP
PGVRGTVGEAGPEGPPGEPGPPGPPGPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAP
DDHNKTDPGVHATLKSLSSQIETMRSPDGSRKHPARTCDDLKLCHPSKRSGEYWIDPNQG
CVEDAIKVYCNMETGETCISANPSSVPRKTWWASRSSDLKPVWYGLDMNRGSQFVYGDTA
VTQMTFLRLLSKEASQNITYLCKNSVGYLDDQTKNLKKAVILKGANDLEIKAEGNSRFRY
TVLHDSCSKRNGNVGKTVFEYRTQNVARLPIIDIAPVDIGSTDQEFGIEIGPVCFV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagtcttggtacaaacgagaacttttttcatcctcgctgctttattaggccga
tttgtaaccataaaagcgcaagaagtggaagagtatgaaggtggagaagatggtgaagaa
atagcctgcactcagaatggacagatgtacctgaacagggatatttggaagccctcaccg
tgccagatctgtgtctgtgacaatggagctattctttgcgatgaaatccagtgtcaggac
ctgctggagtgtgagaacccccaggtgcccccgggagagtgctgtcctgtgtgtccccac
acaccacgggactttgaccccaccataggtagaggaagaaagggacaaaaaggagaacct
ggaatagtgccacctgtttcaggcatacgaggccgcccgggaccagccggacctccaggc
tcacaaggtccacgaggagaacgaggaccaaagggaagacctggtcctcgtggtcctcaa
gggattgatggggaacctggtatccctggccagcctggtgaccctggtcctccagggcat
cccactcacccaggaccagatggaataagcaggcccttttcagctcagatggcaggactg
gatgagaagtctggactcggtagtcagatgggactgatgcctggtgcagtgggtccagtg
ggtccaagaggtcctcagggtctccaaggaaaacaaggtggtgctggtcccacaggccca
cctggtgaacctggagatccaggacctatggggccagttggttctcgtggaccagaggga
cctccaggcaaacctggtgaagatggtgaacctggtagaccaggacaaaccggtgagcct
ggatttccaggatctccaggccctcgaggctttcctggtgctcctggtctgccaggtctc
aagggtcaccggggattgaaaggccttgatggtccaaaaggtgaaattggagcagctgga
gcaaagggagagtctggaccaacgggagccatgggtccaacaggtcctctaggacctagg
ggaataccaggagaaagaggacgaattggaccacagggtgcccctggtggacgtggccag
catggcatgcctgggaagccaggcccaatgggcccacttggcataactggatctccaggt
tttcctggtattcctggcataaagggtgaagcaggtccaacaggtcctcgaggtcctgaa
ggtcctcaaggacaaagaggtgaaacaggtcctcagggcccagctgggtcacaaggtctt
cctggtgctgaagggacagatggttcccctggtgcaaaaggccctactggatccccgggc
actggaggcccccctggattatcaggcccccctggttccccaggaccacagggcagcacc
ggcccccccgggattcgaggccagccgggagaccctggtgtcccaggtttcaagggagaa
gcaggacccaaaggtgaacctggcccacaaggtccccagggtcccattggccccataggt
gaagaagggaaaagaggtcctcgaggtgatccagggtcagtaggtccaccaggtcctgtt
ggagagaggggtgctcctggtaaccgtggtttcccaggttctgatggcttgcctggacca
aagggagcccaaggagagcgtggtccagcagggtcttctggacctaaaggaggtcaggga
gatcctggacgtcctggtgagcctggccttccaggtgcaaggggtttgacaggaaatcca
ggtgttcaaggccctgaaggaaaacttggccccttgggtgctcctggggaagatggacgt
ccaggcccagcaggttccataggaatccgaggccagccaggcagcatgggccttcctggg
cccaagggtggtagtggtgatcctgggaaacctggagaagcaggcaatgcaggagtccca
ggacagagaggagcccctggcaaagatggtgaagttggcccttctggtcctgttggccca
ccaggtctggcaggagaaagaggagaacaaggccctccaggtcccacagggtttcagggc
ttgcctgggccaccaggtcctccaggtgagggaggaaaaccaggtgatcagggcgtgcct
ggagatcctggagctgttggtccattgggccccaggggagaacgtggcaatccaggggaa
aggggagaaccaggtgcctcaggtctccagggtgaaaaggggatggctggaggccatggt
cctgatggcccaaagggaagcccaggccctagtgggacacctggagatccaggaccacca
ggccttcagggcatgcctggagagagagggattgctggaacacctggccctaagggtgat
agaggcggcgtaggtgagaaaggtgctgaaggtacagctggcaacgatggggcaagaggt
ctccctggtccaataggcccaatgggtccagcaggtcccactggtgaaaagggtgaacca
ggtcctcgaggtctagttggtcctcctggttcccgtggaaaccctggttcccgaggagag
aatggcccaactggtgctgttggttttgctggccccccgggccctgatggtcagcctggt
gtcaaaggtgaacctggagaacctggacagaaaggagatgctggatctccaggaccacag
ggtcttgctgggtctcatggtcccccaggccctccaggtgttccgggtctgaaaggtggt
agaggaactcagggtccacctggtgctactggattcccaggatctgctggaagagttggg
cctccaggacctactggagccccagggcctgctgggcctattggtgagccaggaaaagaa
ggtcccccaggtctccgtggtgatcctggttctcatggccgtgtgggagatcgagggcca
actgggcctcctggtggccctggggacaagggtgacccaggggacgacgggcagccgggc
ccagatggcccccctggcccagcaggaactacgggtcaaagaggaattgttggaatgcca
ggacagcgaggggagagaggcatgcctgggctgccagggcctgcaggtactccaggaaag
cagggtcccacagggccacctggtgacaaaggtcccccaggacctattggccagtcaggt
gccactgggcctgtaggtgaagctggtccagaaggacctgctggtaatgatggtactcct
ggacgagatggagctgttggagaacgtggtgatcgtggtgaacctggccctgcaggctta
ccaggttctccaggaggtccaggaactccaggtcctgttggccctccaggagatgcaggt
caaagaggtgaaactggttctcgaggtcccatgggtcccccaggccgtgcaggaaagaga
ggtttgcctggtccccaaggacctcgtggtgacaaaggtgacaatggagatcgaggtgat
aggggccagaaaggacacaggggtttcactggacttcaaggtcttcctggccctcctggt
ccagttggtgaacagggcagtcctggcattccaggcccatttggtcctcggggtccccca
ggtccagttggtccttctggaaaagatggaagtcctggtccacttgggccaactgggcct
cctggtgttcgagggactgtgggagaggctggacctgagggcccaccaggtgagcctggt
cctcctggccctccagggcccccaggccacctcaccgctgccatcggtgacatcatggga
cactatgacgatgccatggcggatccactcccggagttcactgaagatgaagcagccccc
gatgaccacaataaaacagacccaggagtccacgccacgctgaagtctctgagcagccag
atcgagaccatgcgcagccccgatggctccaggaagcacccagcgcgcacctgtgacgac
ctgaagctgtgccacccctccaagaggagcggtgaatattggattgatcctaaccaagga
tgtgttgaagatgctataaaagtgtactgcaacatggaaactggggagacctgcatttct
gccaacccatccagtgtgccccgcaaaacgtggtgggccagcaggtcctctgacttaaag
cctgtttggtatggccttgatatgaacagaggatcacagtttgtgtacggggatacagct
gtcactcagatgacattcctgcgcctcctgtccaaggaagcctcccagaacatcacctac
ctttgcaaaaacagtgttgggtacctggatgaccagacaaagaacctgaagaaagctgtg
attctgaaaggggccaatgacctggagatcaaggcagagggaaacagccgcttcagatac
actgttctgcacgacagctgctctaaacgtaatgggaacgtgggcaagacagtttttgag
tacagaacgcagaacgtggcgcgcttacccatcatcgatattgcgccggtggacattggc
agtaccgaccaggaatttggaattgaaattgggccagtttgctttgtgtaa
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