Zonotrichia albicollis (white-throated sparrow): 102066859
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Entry
102066859 CDS
T07911
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
zab
Zonotrichia albicollis (white-throated sparrow)
Pathway
zab04510
Focal adhesion
zab04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102066859 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102066859 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zab00536
]
102066859 (TNR)
Glycosaminoglycan binding proteins [BR:
zab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
102066859 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_Tenascin
Pur_ac_phosph_N
EGF_2
Lzipper-MIP1
TSC22
Motif
Other DBs
NCBI-GeneID:
102066859
NCBI-ProteinID:
XP_005490261
Ensembl:
ENSZALG00000008637
UniProt:
A0A8D2MMW2
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MGTDGENPILRSVVISFNLLLLGAVLKPFECHLEVMTEPAQRTAVDEAAGLTNCSPPTKE
QPMVFHHIYNINIPLDSCCSSMFKSSGEEVSSEDDRLAEYTEQTSDSESQVTFTHRINMP
KQACKCSTSLPSLQELLSRIEMLEREVSILRDQCTSNCCQENAATGQLDYIPQCSGHGNF
SLESCSCVCMEGWAGSNCSEPLCPGGCSSRGVCLEGQCICDSDYGGEDCSQPRCPAGCGS
RGLCVDGECVCEEGFTGDDCSELRCPRDCSGRGRCVNGTCECHEGFAGHDCGRQRCPAGC
GGRGLCRDGLCVCETGYGGHDCSEVSPPENLRVTGISDSSIELAWDSAGAATEYVVSYQP
AVPGGTQLQQRVPGDWSSITLTDLEPGVAYNVSIYAVISDVFSSPVTSRVMTNLATPQGL
KFKTITETTAEVQWEPFSFPLDGWEISFIPKNNEGGVIAQLPSTVTTFNQTGLKPGEEYT
VTVVALKEQARSPPTSDSVSTLIDGPTQILVRDVSDTVAFVEWSPPRAKVDAILLKYGLA
DGEGGRTTFRLQPPLSQYSLQALRPGARYHLAVSALRGANESRPAFAQFTTEIDAPKNLR
VGSRSPASLELTWDNSEAEAHSYRVVYSTLAGEHYHELLVPRHAGPTTRATLTDLVPGTE
YGIGISAVMDSQQSVPATMNARTELDSPRDLLVTASTETSISLAWTKATGPIDHYRVTFT
PASGMASEVTVSRDESQLTLSELEPGTEYTISIIAERGRQQSLEATVDAFTGVRPISQLH
FSQLTSSSVNVTWSDPSPPADRLILTYSRRDEEEEEAQQVTLDGTRRHTSLTGLQPATEY
LVSLVAVHGTISSEPVVGSITTGIDAPRDLRVGNVTQESMIVYWSAPIAAFDHYRISYRA
AEGRTDSMAISRDATEYTLQDLQPATKYEIELKSVRGREESELASITAYTAMDVPLGVTA
TNITPTEALLQWNPPLSEVESYVLILTRRAVAGETILVDGDNQEYQLTNLLPSTTYTVSM
YATSGPLTSQTISTNFTTLLDPPTNLTASEVTRRSALLSWAPPMGEIENYIMTYRSTDGS
RKELIVDAEDTWIRLEGLSETTEYTVHLQAAQNAVRSGLVSTTFTTGGRVFANPQDCAQH
LMNGDTLSGVYTISINGDLSQRVPVYCDMTTDGGGWIVFQRRQNGLTDFFRKWADYRVGF
GNLEDEFWLGLDNIHKITSQGRYELRIDMRDGQEAAYAYYDKFSIGDSRSLYKLRIGDYN
GTSGDSLTYHQGRPFSTKDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQGI
NWYHWKGHEFSIPFVEMKMRPYNHRNISGRKRRSLQL
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggggactgatggtgaaaacccgatcctgaggagtgtggtcatcagcttcaacttgctc
ctgctgggcgctgtcctcaagccgtttgagtgccacctggaggtgatgacagagccggcc
cagaggacagcggtggatgaggcagctggcctcaccaactgcagcccacccaccaaagag
cagcccatggtcttccaccacatctacaacatcaacatccccctggacagctgctgctcc
tccatgttcaagtcttcgggcgaggaggtgagttcagaagacgaccggctggcagagtac
acagagcagacctccgacagcgagagccaggtcaccttcacccacaggataaacatgccc
aagcaggcctgcaagtgctccacctccctcccatccctgcaggagctgctgagcaggatt
gagatgctggagagggaggtctccatcctccgggaccaatgcacctccaattgctgccaa
gaaaatgcagccacagggcagctggattacatcccgcagtgcagcggccacgggaatttc
agcctggagtcgtgcagctgcgtgtgcatggagggctgggcgggcagcaactgctcggag
ccgctgtgcccggggggctgctccagccgcggcgtgtgcctggagggccagtgcatctgc
gacagcgactacggcggcgaggactgctcccagccgcgctgccccgccggctgcggctcc
cgcgggctctgcgtggacggcgagtgcgtgtgcgaggagggattcaccggggacgactgc
tcggagctgcgctgcccccgcgactgctcgggccggggccgctgcgtgaacggcacctgc
gagtgccacgagggcttcgccgggcacgactgcggccggcagcgctgccccgccggctgc
ggcggccgcgggctctgccgcgacggtctctgcgtctgcgagacaggctacggcggccac
gactgctccgaagtgtctccccctgagaacctgcgggtgacggggatcagcgacagctcc
atcgagctggcctgggacagcgccggggcagccactgagtacgtggtgtcctaccagcct
gccgtgcctgggggcacccagctccagcagagggtgcctggggactggagcagcatcacc
ctcacggacctggagccaggcgttgcctacaatgtcagcatctatgcagtcatcagtgat
gtcttcagcagccctgttacctccagggtgatgaccaacctcgccacaccacaggggctg
aagttcaagaccatcacagagacaacagcagaggtgcagtgggagcccttctccttcccc
ttggacggctgggagatcagcttcatccccaagaacaacgagggtggtgtgattgcccag
ctccccagcaccgtcaccaccttcaatcagacggggctgaagccgggggaggagtacact
gtcaccgtggtggccctgaaggaacaagccagaagccctcccacctctgacagcgtctca
accctcatcgacggcccgacgcagatcctggtgcgggacgtctcggacacggtggccttc
gtggagtggagcccgcctcgcgccaaggtggacgccatcctgctgaagtacgggctggcg
gacggggagggcggcaggaccacgttccgcctgcagccccccctcagccagtactccctg
caggccctgcgccctggcgcccgctaccacctggccgtcagcgccctgcgcggcgccaac
gagagccgccccgccttcgcgcagttcaccacagagatcgacgcccccaagaacctgcgg
gtgggctcgcggagccccgccagcctcgagctcacctgggacaacagcgaggccgaggca
cacagctacagggtggtgtacagcaccctggccggggagcactaccacgagctcctggtg
ccgcgccacgccggccccaccacccgcgccaccctcacagatctggtgccgggaacagag
tatggcattgggatttcagccgtgatggacagccagcagagcgtgccagcgaccatgaat
gccaggaccgagctcgacagcccacgggacctgctggtgacagcctccactgagacatcc
atctcactggcttggaccaaagccacaggtcccatcgaccactaccgtgtcaccttcacc
cctgcctcaggaatggcctctgaagtgacagtgtccagggacgagtcacagctcacactc
tcagagctggagcccggcacagagtacaccatttccatcatcgctgagagggggcggcag
cagagcctggaggccactgtggatgccttcacaggtgttcggcccatctcccagctgcac
ttctcccagctgacatcctccagtgtgaatgtcacatggagtgacccctccccaccagca
gaccgcctcatcctcacctacagccgccgggacgaggaggaggaggaggcccagcaggtc
acactggatggcacccgcaggcacaccagcctgacaggcttgcagccagccacagagtac
ctggtgtccctagtggccgtgcatggcaccatcagctctgagcctgtcgtgggctccatc
actacagggattgatgcaccaagggacctcagggtgggcaatgtcacccaggagtccatg
attgtctactggagtgctcccatcgctgcctttgaccactacaggatatcctaccgtgct
gctgaaggaaggacagacagcatggccatctccagggatgccactgagtacaccctgcag
gacctgcagcctgccacaaagtatgagattgagctgaagagcgtgcgaggccgggaggag
agtgagctggcctccatcactgcatacacagccatggatgtccccctgggggtcacagcc
accaacatcactcccaccgaggcgctgctgcagtggaacccgccgctgtcggaggtggaa
agctacgtgcttatcctcacccgccgtgcagttgcaggagaaacaattcttgtggatgga
gacaaccaggagtaccagctgaccaacctgctgcccagtaccacctacacagtgtctatg
tatgccaccagtgggcctctcaccagccagaccatcagcaccaacttcaccactcttttg
gatcctccaaccaatctgacagccagtgaagtcacgcgacggagcgccctgctgtcctgg
gctcctcccatgggagagattgagaattacatcatgacctacagatccaccgatggcagc
aggaaggagctgattgtggatgcagaggacacgtggatccgcctggaggggctttctgag
accacggagtacacggtgcacctgcaggctgcccagaacgccgtgcgcagcggcctcgtc
tccaccaccttcaccacaggaggacgtgtgtttgctaaccctcaggactgtgcccagcac
ctgatgaatggagacacgctgagcggggtctacaccatctccatcaacggggacctcagc
cagcgggtgcccgtgtactgtgacatgaccactgatggagggggctggattgtgttccag
cggcggcagaatgggctgaccgatttctttcggaaatgggcagattaccgcgttggcttt
ggaaacctggaggatgagttttggctgggcttggacaacatccacaagatcacgtcccaa
gggcgctacgagctgcggatagacatgagggatggccaggaggcagcatatgcctactat
gacaagttctccattggtgactccaggagcctctacaaactgcgcattggggactacaat
ggcacttcaggagactccctcacctatcaccagggacgccccttctccaccaaggacagg
gacaatgatgttgctgtgaccaactgtgccatgtcctacaaaggggcctggtggtacaag
aactgccaccgcaccaacctcaacggcaagtacggagagtcccggcacagtcagggcatt
aactggtatcattggaaaggccatgagttctccatcccctttgtggaaatgaagatgcga
ccttacaaccaccgtaacatctctgggaggaagagacggtccctacagctctga
DBGET
integrated database retrieval system
