Zhongshania aliphaticivorans: AZF00_11970
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Entry
AZF00_11970 CDS
T04315
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
zal
Zhongshania aliphaticivorans
Brite
KEGG Orthology (KO) [BR:
zal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zal03009
]
AZF00_11970
Enzymes [BR:
zal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
AZF00_11970
Ribosome biogenesis [BR:
zal03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
AZF00_11970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
RRM_9
Motif
Other DBs
NCBI-ProteinID:
AMO68971
UniProt:
A0A127M702
LinkDB
All DBs
Position
complement(2696440..2697153)
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AA seq
237 aa
AA seq
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MSSSKSRLDRFISRQTGIKRGDVRSVLAQGRVLVDGKAARDIAQQIDQFSHVTFDGRSLQ
AQQALYVMLNKPAAVVSATKDAEHTTVIDILRRDDREQLHIAGRLDFNSTGLILLSNDGD
WSRQLSLPERQIPKVYTVTLAQPLNTDYVAAFAAGMYFEYENITTRPAQLRIVSDYVAEV
SLCEGRYHQIKRMFGRFQNEVLTLHRHRIGGLDLDESLAPGESRDLTRSELAQIAHY
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctcttctaagtcaaggctagaccgctttattagccgccaaactggtattaagcgc
ggcgatgttaggtcggttctcgcgcaggggcgggtgctggtagacggcaaagcggcgcgg
gatattgcccagcaaatcgatcagttctcccacgttacgtttgacggtcgcagcctccaa
gcgcaacaagctttgtatgtcatgctcaataagcccgcagcggtggtcagtgcgactaaa
gatgcagaacatactaccgttatagacatcctacgccgtgatgaccgagagcaactgcat
attgccggccgcttagacttcaattccacgggcttgatcttgctcagtaatgatggtgat
tggtctaggcagttaagcttgccggagcgtcaaataccaaaggtatataccgtgacgctt
gcgcagccgttaaatactgattatgttgcggcctttgcggcgggcatgtactttgagtat
gagaacatcaccacccgtcccgcgcagttaaggattgtgtctgactatgtggcggaggtc
agcttatgcgagggccgctatcaccaaatcaaacgcatgtttgggcgtttccaaaatgag
gttttaacattgcatcgccaccgcattggtggcctagatttggatgagagcttggccccg
ggtgagagccgcgatttaacccgcagtgaacttgctcagatagctcactactaa
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