Zalophus californianus (California sea lion): 113911309
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Entry
113911309 CDS
T07874
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03013
Nucleocytoplasmic transport
zca03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113911309 (SRRM1)
03015 mRNA surveillance pathway
113911309 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zca03019
]
113911309 (SRRM1)
03041 Spliceosome [BR:
zca03041
]
113911309 (SRRM1)
Messenger RNA biogenesis [BR:
zca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113911309 (SRRM1)
Spliceosome [BR:
zca03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
113911309 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
113911309
NCBI-ProteinID:
XP_027429589
EnsemblRapid:
ENSZCAG00025020899
UniProt:
A0A6J2BCF1
LinkDB
All DBs
Position
4:18280762..18312919
Genome browser
AA seq
918 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSTREPRSPQPNKRHSPSPRPRALQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSIRRVSSSRSVSGSPEPAAKKPPA
PQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAITPAAPAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLEKH
LREKALRSMRKAQVSPQS
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatgggaaaaatgctagagaa
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggaaaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccggaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaggaggccacttct
actagtgacatcctgaaggttcccaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaaaaattccaaaaaagaaaaggagaaggagaagacccgaccaagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacgt
cgtcatagatcccgatcaagatcatactcacctagaaggaggccaagtccgagaaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgccgcctccacccaggcacagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcatcctcttcgtcccgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcaagtccgcccaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacgagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcggcagattctgtgcag
cagagacgtcagtacagacgacagaaccagcagtcctcatctgattctggctcctcttct
tcctcagaagatgagcgacccaagaggtcccacgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaagagact
tcccctcggatgcaaatgggaaagcgatggcaatcgccagtgactaaaagtggcagacgg
aggaggagtccctccccaccacctaccagaaggcgacgttctccttctcctgcccctcct
cctcgtaggcgcaggtcccccactccgccaccacgacgaaggactccttctcctcccccc
cgccggcgctcaccttccccaagaagatattctcctccgatacagaggagatactctcct
tctccacctccaaagagaagaacggcttctccccctccccctcctaaacgaagggcatca
ccatctccaccaccaaagcgtcgggtctcccattctccacctcccaaacaaagaagctcc
ccagtcaccaagagacgttcgccttcattatcatcaaagcataggaaagggtcttccccg
agccggtctacccgggagccccggtcaccacaaccaaacaaaaggcattcgccctcacca
cggcctcgagctcttcaaacctcctcaagtcctccacctgttcgaagaggagcatcgtca
tcaccccaaagaaggcagtccccttctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaagacaaaaaaggctgcctcaccaagtcctcagtctataaggagg
gtctcgtcctcccgatctgtctcaggatctcctgagccagcagctaaaaaacccccagca
cctcagtctcctgtccagtcccagtccccctctaccaactggtcaccagcggtacctgtc
aaaaaggctaaaagcccaaccccaagcccatctccagcgaggaactcagacccagaagga
ggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aagcacaaaaaacacaagaaggaaaaggccgtggcggcagccgccgcagcagccatcacc
cctgcggcccccgctgcccccacgaccacatcggcacaggaggaaccggaggcagagccc
gagcctaagaaggagaccgaaagcgagcccgaagacaacctcgacgacttagaaaagcac
ctgcgtgaaaaggcgctgaggtcgatgcggaaggctcaagtgtccccacagtcttag
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