Zalophus californianus (California sea lion): 113916783
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Entry
113916783 CDS
T07874
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113916783 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zca03036
]
113916783 (MBD4)
03400 DNA repair and recombination proteins [BR:
zca03400
]
113916783 (MBD4)
Chromosome and associated proteins [BR:
zca03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
113916783 (MBD4)
DNA repair and recombination proteins [BR:
zca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113916783 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
NUMOD1
Motif
Other DBs
NCBI-GeneID:
113916783
NCBI-ProteinID:
XP_027439549
EnsemblRapid:
ENSZCAG00025000027
UniProt:
A0A6J2C6C9
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All DBs
Position
1:complement(54144919..54154057)
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AA seq
569 aa
AA seq
DB search
MAGMESTSLGDCGAAPSVTSSERSAPDRPCDLREEDGALGSERVGEDEKQAVIKSSSECN
TLLQESIASAQTGDTTMTECHKSVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKS
SLANYLHKNEETALTPEDFDFTVLSKRGIKSRYKNCSIAPLTSQMQNESNSSNRNLRTRS
WWKKDVFPLPSGSLELQNSRGLSNFKEDEGVNDVDSRKVRKPKGKVTILKGIQIKKTKTL
CQKGLPDSAQSNKKRKSEYKKADAESEPVVQESQLDKTLSISDAGASNKTLSVTSEEKRL
VKEQSLSSGSNFCFQQITSGIINKLSSTEEAEHNKNCEENFLESEEIKSKVEVGERKEHL
HTDILKCGSEMDNNCSQTEKDSISVKICQEDTIPRTQIEKRKTSLYFSSKYNREALSPPR
RKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAEVA
RTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWKYPIELHGIGKYGNDSYRIFCVN
EWKQVHPEDHKLNKYHDWLWENHEKLSLS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatggagagtacgagcctgggggactgcggagctgccccctcggtcacctcc
agtgagcgctcagccccagaccggccttgtgatctccgcgaggaagatggtgctctggga
tcggaaagagtgggagaagatgagaagcaagcggtaataaaaagcagcagtgagtgtaat
accctactgcaagaatccattgcttctgctcagactggtgatactacaatgacagaatgc
cataagtctgtcccatgcggatgggaaagagttgtgaagcaaaggttatcagggaaaaca
gcaggaagatatgatgtatattttatcagcccacaaggactgaagttcagatccaaaagt
tcacttgctaactatcttcacaaaaatgaagagactgctcttacgccagaagattttgat
tttactgtactttctaaaaggggcatcaagtccagatataaaaactgcagcatcgctcct
ctgacatcccaaatgcaaaatgaaagtaatagttcaaaccggaacctcaggacacgaagc
tggtggaaaaaagatgtctttcctctaccaagtggtagtttggaattgcaaaatagcaga
ggactgtctaactttaaagaagatgagggcgttaatgatgttgactccagaaaggttaga
aagcccaaaggaaaggtgactattttgaaaggaattcaaattaagaaaactaaaaccctg
tgccagaagggtcttccagattctgctcaaagtaataagaaaagaaaatctgagtataaa
aaggcagatgctgaaagtgaacctgttgtgcaagaaagtcagcttgataaaacactctcc
atttctgatgctggagcaagcaacaagaccctcagtgtaaccagtgaagaaaagaggctt
gtaaaagaacaatcattgagttcaggatcaaatttttgttttcaacaaataacttctggc
atcataaacaaattaagttcaactgaagaagcagaacacaacaagaattgtgaggaaaac
tttttagaatctgaggaaataaaatcaaaagtagaagttggggaaaggaaggaacatttg
catactgacattttaaaatgtggctctgaaatggacaacaactgctcacaaaccgagaaa
gactctatttctgtgaaaatatgtcaagaagataccattccacggacacaaatagaaaaa
aggaaaacaagcctatatttttccagcaaatataacagagaagctcttagcccccctcga
cgcaaagcctttaagaagtggacacctccccggtcaccttttaatcttgtccaggaaaca
cttttccacgatccatggaagctcctcattgctaccatatttctcaaccggacctcaggc
aaaatggcaatccctgtgctctgggagtttctggagaagtacccttcggctgaggtagca
agaaccgcagactggagagatgtgtcagagcttcttaaacctcttggtctctacgatctt
cgagcaaaaaccattatcaagttctcagatgaatatctgacaaagcagtggaaatatccg
attgagcttcatgggattggcaaatatggcaacgactcttaccgaattttttgcgtcaat
gagtggaagcaggtgcaccctgaagaccataagttaaataaatatcatgactggctttgg
gaaaatcatgaaaaattaagtctgtcttaa
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