Zalophus californianus (California sea lion): 113918527
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Entry
113918527 CDS
T07874
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
zca
Zalophus californianus (California sea lion)
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zca04121
]
113918527 (PDZRN3)
Enzymes [BR:
zca01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113918527 (PDZRN3)
Ubiquitin system [BR:
zca04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
113918527 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-TRAF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
Tricorn_PDZ
zf-RING_6
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
113918527
NCBI-ProteinID:
XP_027442839
EnsemblRapid:
ENSZCAG00025006403
UniProt:
A0A6J2CG67
LinkDB
All DBs
Position
1:complement(40162417..40403511)
Genome browser
AA seq
1069 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCSRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNAALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSTEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPTPPVLDAYLLPEEHPSAHEYYDPSDYIGGVHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDHLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASCTPL
AGQRKLTCSQDTLGSSDLPFSNESFLSADCADADYLGIPVDECERFRELLELKCQAKSGS
PYSLYYASSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEMSPDNSLR
RVAEGSSCAGSEGAAGSTEAYGPAPKNLLSITEDPEVGSASYSPTPPPPRELEAGPAPES
RERRPSDDSGSPGPGPKLGGSYLAPFPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQ
SQMSLVSMCKDLTSAGQAEARMEWKVKVRSDGTRYITKRPVRDRLLRERALKIREERSGM
TTDDDAVSELKLGRYWSREERKQHVVRAKEQKRRREFMMQSRLDCLKEQQAADDRKEMNI
LELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcactg
tgccacaaggtcttggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgttgccttgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagttggacatc
aagtgcgcgcacgcggcgcgcggctgcagccgggtggtcaagctgcagcagctgcccgag
caccttgagcgctgcgacttcgcgcccgcgcggtgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggccggtgggc
cgctgccaagagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgggccctgcgggcgcacaacgcggcgctgcaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgttgcgcgcgggcaagcgcgagaagtcgctggtggcg
caactggccgcggcgcagctggagctgcagatgaccgccctgcgctaccaaaagaagttc
accgagtacagcgcgcgtctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggtgaagaaaccaaaagtctgactcttgtcctccatcgggactctggttccctggga
ttcaatattattggtggccggccgtgtgtggacaatcaagatggatcatccactgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggtaaagacttatccagagcgactcatgaccaggct
gtggaagctttcaagaccgccaaagagcccattgtggtacaggtgttgaggagaacgcct
cggaccaaaatgttcacacctccgtcagagtcgcagctggtggacacaggaacccaaacc
gacatcaccttcgagcacatcatggccctcaccaagatgtcctctcccaccccacctgtg
ctggatgcctatctcctgccagaggagcacccctcggcccacgagtactatgatcccagt
gactacattggaggcgtccatcaggaaatggacagggaggaactggagttggaggaagtg
gatctgtacagaatgaacagccaggacaagctgggcctcaccgtgtgctaccggactgat
gatgaagatgacattgggatttacataagtgagatcgaccctaacagcatcgcggccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtacagaac
cgtgaagaggctgtggctctcctaaccagtgaagaaaacaagaacttttccttgctgatt
gctaggcccgaactccagctggacgagggctggatggacgacgaccgaaacgactttctg
gaccacttgcacatggacatgctagaggagcagcaccaccaggccatgcagttcactgcc
agcgtgctgcagcagaagaagcatgaagaagacggggggaccacagatacagccaccatc
ctgtccaaccagcacgagaaggacagcggtgtgggacgcaccgacgagagcacgcgcaat
gacgagagctcggagcaagagaacaacggggacgacgccaccgcgtcgtgcaccccgctg
gccgggcagaggaagctcacgtgcagccaggacaccctgggcagcagcgacctgccgttc
agcaacgagtccttcctgtcggccgactgtgccgacgccgactacctgggcatccccgtg
gacgagtgcgagcgcttccgggagctcctggagctcaagtgccaggccaagagtggcagc
ccctacagcctgtactacgccagcagccccctagacgccagcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgggcacacaagatgcagcagctccgggagcagtaccgcgagtcgtggatg
ctgcacaatagcggcttccgcaactacaacaccagcattgatgtccgcaggcacgagctg
tcggacatcaccgagctccccgagaagtccgacaaagacagctcgagcgcctacaacacg
ggcgagagctgccgcagcaccccgctcaccctggaaatgtcccccgacaactccctgagg
agagtggcagagggcagcagctgcgcgggcagcgagggggccgcggggagcacggaagcc
tatgggccggcccccaagaacctgctctccatcaccgaggatcccgaggtgggcagcgcc
agctacagcccaactcctcctcctcctcgagagctggaggccggcccggccccggagagc
agggagcggaggcccagcgacgacagcgggagcccgggccccggccccaagctcggcggc
tcctacctggcgcccttcccgcactcgccctacaaacacgcccacatccccgcacacgcg
cagcactaccagagctacatgcagctgatccagcagaagtcggccgtggagtatgcgcag
agccagatgagcctggtgagcatgtgcaaggacctgacctcggccggccaggcggaagcc
aggatggagtggaaagtgaaggtccgcagcgacggcacgcgctacatcaccaagcggccg
gtgcgggaccgcctgctgcgcgagcgcgcgctcaagatccgcgaggagcgcagcggcatg
accaccgacgacgacgcggtgagcgagctgaagctggggcgctactggagcagagaggag
aggaagcagcacgtggtgagggccaaggagcagaagcgcaggcgcgagttcatgatgcag
agccggctggattgcttgaaggagcagcaagccgccgacgacaggaaggagatgaacatc
cttgaactgagccacaaaaagatgatgaagaagaggaacaaaaagatatttgacaattgg
atgacaatccaagaactcttaacccacggcacaaaatcaccagatggcacgagagtatac
aattccttcttatccgtgactactgtataa
DBGET
integrated database retrieval system
