Zalophus californianus (California sea lion): 113919967
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Entry
113919967 CDS
T07874
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca04151
PI3K-Akt signaling pathway
zca04510
Focal adhesion
zca04512
ECM-receptor interaction
zca04820
Cytoskeleton in muscle cells
zca04926
Relaxin signaling pathway
zca04933
AGE-RAGE signaling pathway in diabetic complications
zca04974
Protein digestion and absorption
zca05146
Amoebiasis
zca05165
Human papillomavirus infection
zca05200
Pathways in cancer
zca05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113919967 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113919967 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113919967 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113919967 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
113919967 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
113919967 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113919967 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
113919967 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
113919967 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
113919967 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
113919967 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zca04147
]
113919967 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
zca00536
]
113919967 (COL4A3)
Exosome [BR:
zca04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113919967 (COL4A3)
Glycosaminoglycan binding proteins [BR:
zca00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113919967 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113919967
NCBI-ProteinID:
XP_027445809
EnsemblRapid:
ENSZCAG00025003063
UniProt:
A0A6J2CQ14
LinkDB
All DBs
Position
3:183617617..183744608
Genome browser
AA seq
1670 aa
AA seq
DB search
MRPGTAPRSPALLLPLLLVLLAAAPTTGKGCVCKDKGPCFCDGIKGEKGEKGLPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGPKGEQGFPGLPGTPGYPGIPGAVGLKGEKGAPAAEAIDLDGRGDPGLPGAPGS
QGLPGLPGFPGPVGPPGPPGFSGFPGTMGPPGPKGHMGDKVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTDLKGEKGDKGALGKSGPPGPSGPPGESYGSQKGAPGEPGPQGKPGE
DGAPGFPGTEGSKGNRGFPGLRGKDGIKGWKGDIGPPGFRGPTEYYDSYQEKGDEGLPGP
PGPKGARGPQGPSGSPGVPGSAGSLRLGPRGAPGSPGVKGSKGERGPPGKNAVGPPGSPG
CPGSPGPIGLPGYPGPPGDIIFRKGPPGDGGLPGLVGFPGIPGADGPKGEPGLLCIQCPC
VPGPVGPPGLPGLDGIKGVPGGQGPSGIKGSPGSPGSTGLPGFPGFPGAPGDPGLTGEKG
GASPPEGEAGAPGDPGPRGHPGRRGLDGTPGTPGVKGSPGPKGELALSGEKGDQGPPGYP
GNPGSPGPAGPPGPSNYGPQGEPGPKGTQGVPGAPGPPGEAGPRGEFVISTPVPGPPGPP
GPPGRAGPQGPPGVPGSIGKCVDPGLPGPAGEPGIPGIGFPGPPGPKGEQGFPGAKGAPG
CPGEMGKPGSPGEPGLPGAKGEPGVAMPGEPGTPGFPGERGASGENGEIGLPGPPGLPGI
PGTGGLDGPQGDPGKPGPPGEKGPPGRCTEGPRGAQGLPGLNGLEGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEMGPPGQKGYPGNPGFFGLPGEKGMMGMMGYPGNTG
PPGPPGNPGTPGQRGSFGIPGAKGEKGPPGAKGEEGDKGPRGPSQISNLLGDKGEPGLKG
SAGKPGEKGNRGIPGLPGLKGLEGPPGPPGPPGLRGDPGSTGNPGEPGLHGGPGSMGNMG
VPGPKGQRGTLGPPGLTGRTGLPGVHGLQGDKGEPGYSAGTRPGPPGPKGDPGLPGDTGR
KGERGLPGTPGHSGPTGTEGAPGHPGSPGHPGKPGPDGDLGLKGIKGFLGSPGVKGPPGP
PGFLGSPGPMGMRGSQGHDGIPGPAGEKGETGLLGAHPGPRGSPGAPGAKGDRGAPGLPG
LPGRKGAVGDAGPQGPPGVTGLPGPPGFPGAIIPGQKGNRGPPGFRGNPGEPGPPGPPGS
HVRGIKGDKGLMGEPGPRGLPGTVGAEGPPGPPGAPGSPGLPGLRGDPGFHGFPGVKGEK
GNPGFLGPAGPPGQIGPKGPPGVRGDPGTIKIISLPGSPGPPGRAGGPGMQGEPGPPGPP
GILGPCGPRGKPGKDGRPGTPGPIGEKGNKGCKGEQGPPGSDGLPGLKGKPGHIGPPATV
TMMRGFIFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPALMPTDMAPITGRALEPYISRCTVCEGPTNAIAI
HSQTTDIPSCPNGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
ACNYYSNSYSFWLASLNPQRMFRKPIPSTVKAGELEKIISRCRVCMKRRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccggcacggcgcccaggtcgcccgcgctgctactgccgctcctgctggtgctc
ctggcggcggcgcccacgacaggcaagggttgtgtctgtaaggacaaaggcccgtgcttc
tgtgatgggatcaaaggggagaagggggagaaaggccttcccggacctgctggttctcct
ggccagaagggattcccaggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggactcccaggactcacgggtcccaaaggtgtgaggggaataactggattgccggga
ttttcaggtcctcctggacttccaggcacccctggccatcctgggccttatggacctgct
ggtgtcccaggatgcaatgggcctaagggtgagcaagggtttccaggccttccggggaca
ccaggctacccggggatcccaggtgctgttggtttgaaaggagaaaagggtgctcctgct
gcagaagctatagaccttgatggaagaggtgaccctgggttgccaggagctccgggatcc
cagggtttgccaggccttccaggctttccaggacctgttggtccacctggccctccagga
ttctctggctttccaggaaccatgggacctccaggacctaagggtcacatgggcgataaa
gtgataggacaaaaaggagagcggggtgtgaaaggattaacaggaccccccggaccacca
ggaacggttattgtgacgctaacaggcccagataacagaacggacctcaagggggagaag
ggagacaagggagccctggggaaatccggacctcctggaccctcaggaccacctggagaa
tcttatggatctcaaaaaggtgctcctggagaacctggcccgcagggaaaacctggcgaa
gatggtgcccctggtttccctggcactgagggatccaaaggcaacaggggcttccctggg
ttacggggtaaagacggcattaaggggtggaaaggggacattggccctccaggatttcgt
ggtccaacagaatattatgattcataccaggaaaagggagatgaaggacttccaggccca
ccagggcccaaaggagctcgtggcccacagggtcccagcggctcccctggggttcccgga
agtgctgggtcattgaggcttggccccagaggagcccctggatctccaggagtgaaagga
agtaaaggggaacgagggcccccaggaaagaatgcagtggggcctcctgggtccccaggt
tgtcctggttcaccaggccctataggactgccaggatatccaggaccaccaggtgacatc
atctttcgcaaaggtccacctggagatggcggactcccaggccttgtagggtttccagga
atcccaggagccgatgggcccaaaggggaacctggccttttgtgcatacaatgtccttgt
gtcccagggcccgtgggtcccccaggactgccagggttggatggcataaaaggagtccca
ggaggacaagggccatctggcattaaaggaagccccgggtccccaggaagtacgggtctt
ccaggatttccaggattcccgggtgctccgggggatccaggacttaccggagaaaaaggt
ggagcgtctccgcctgagggagaagcgggtgccccaggggaccccgggcccagagggcat
cctggaagaaggggcctggatggaactcctggaactcccggggtcaaagggtcgccaggg
cccaaaggtgaactggccctgagtggtgagaagggggatcagggtcctccagggtatcct
ggcaaccctgggtccccaggacctgcaggaccacctggaccatcaaactatggaccacag
ggagagcctggtccaaagggcacccaaggagttcctggagcccctggaccacctggagaa
gccggtcctaggggagaattcgttatttcgacaccagtcccagggcccccaggacctcca
gggccccctggccgtgctggcccccaaggtccacctggtgtccctggatccataggaaaa
tgtgttgatccaggtcttcctgggcctgctggcgaaccaggaattccaggaatcggcttc
cctgggccccctggacctaagggagagcaaggttttccaggagcaaaaggagcaccgggt
tgtccaggagaaatggggaagcccgggtcacctggagaaccgggtctcccaggagccaag
ggagaaccaggagtagccatgcctggagaaccaggaacaccaggttttccaggagaaaga
ggcgcttctggggaaaatggagaaattggactccctggacctccaggtctccctgggatt
ccaggaactggagggcttgatggaccccaaggggatccagggaagcctggaccacctgga
gaaaaaggacccccaggaaggtgcacggagggtcccaggggggcccaaggacttccagga
ttaaatgggttggaaggacaacaaggcagaagaggtgaaacagggccaaagggagaccca
ggtattccaggcttggataggtcaggctttcctggagaacctggaccaccagggatgcca
ggtcatcgaggtgaaatggggccacctggtcaaaaaggatatccaggaaatccaggattt
tttggactaccaggtgaaaaaggaatgatggggatgatgggctatccgggaaacactggc
cctcctgggccccccggaaacccaggcaccccaggacagaggggtagctttggaattcca
ggagcaaagggtgagaaagggcccccaggagccaagggggaagaaggagataaaggacct
cgggggccttctcaaatatccaatttactgggggacaaaggagaaccaggcctcaaagga
tctgctggaaagcctggtgagaaaggaaacagaggcattccagggttaccaggtttaaaa
ggactggaaggaccacctggaccaccaggtccaccaggcctcaggggagatccaggcagc
actgggaatcctggggaaccaggactgcatggcgggccaggaagcatggggaacatgggg
gtgccaggtcctaaaggacaaaggggaactttgggaccaccaggtttaactggaaggacg
ggtctcccaggtgttcacggtctccaaggagataagggagagccaggttattcggcaggt
acaaggccaggaccaccaggaccaaagggagatccaggattgccaggtgacacgggaagg
aaaggagagcgagggctccctggcacccctggacattcgggccctactggaactgaggga
gcccctggacatcccggaagtcctggccatccaggcaagccgggccctgatggtgatttg
gggttaaaaggcatcaaaggcttccttggttctccgggagtcaaaggccctccaggacct
ccaggatttctaggatctcctggaccaatgggtatgagaggcagccagggacatgatgga
attcctggtccagcgggagaaaagggagaaacaggtttgctgggggcacatccaggcccg
agagggagccctggtgctccaggagccaaaggagacaggggcgccccgggcttacctggc
ctcccgggcaggaaaggggcagtgggagatgcggggccacagggaccccctggcgtgaca
ggactcccagggccaccaggttttcctggcgcaatcatccctggccagaaaggaaatcga
ggcccaccaggcttcagaggaaacccaggtgagcctggtcctccgggacctccagggagc
cacgtaagaggcatcaaaggagacaagggactcatgggcgagcctggccccaggggtctg
cccggaactgtaggagccgaggggccaccgggtccgccgggagcaccaggaagcccaggt
ctgccagggctcagaggtgatcctggattccatggatttccaggtgtgaaaggggagaag
ggtaatccgggatttctaggaccagctggacctccagggcaaattgggccaaaaggacca
cctggtgtacgtggagaccctggcaccattaagatcatctcccttccaggaagcccaggg
ccacctggtcgtgctggaggaccaggaatgcaaggagaacctgggccaccggggccacca
ggaatcctaggaccctgtgggccaagaggtaaaccaggcaaggatggaagaccaggaact
cctgggccaattggagaaaaaggaaacaaaggttgtaaaggagagcaaggaccacctgga
tcagatggactgccaggcttgaaggggaaacctggacacattggaccacctgcaactgtg
acaatgatgagaggctttatcttcaccaggcatagtcagaccacagcgattccctcctgt
ccagaagggacagagccgctctatagtgggttttctcttctctttgtacaaggaaatgaa
caagcccatggacaagacctgggaactcttggcagctgtctgcagcggtttaccacaatg
ccattcttgttctgtaacatcaatgatgtatgtaattttgcatctcgaaatgattattca
tactggctgtcaactccagctctgatgccgaccgacatggctccaattactggcagggcc
ttagagccttatattagcagatgcactgtctgtgaaggtcctacgaatgccatagccatt
cacagccaaaccactgacattccctcatgtcccaatggctggatttctctctggaaagga
ttttcatttatcatgttcacaagtgcgggttctgagggcgctgggcaagcactggcctcc
cctggctcttgcttggaagaattccgagccagtccatttatagaatgtcatggaagagga
gcgtgcaactactattcaaattcctacagtttctggttggcttcattaaacccccaaaga
atgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaagataataagt
cgctgtcgggtgtgcatgaagagaagacaatga
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integrated database retrieval system
