Zalophus californianus (California sea lion): 113934154
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Entry
113934154 CDS
T07874
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca02010
ABC transporters
zca04148
Efferocytosis
zca04975
Fat digestion and absorption
zca04979
Cholesterol metabolism
zca05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113934154 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113934154 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
113934154 (ABCA1)
04979 Cholesterol metabolism
113934154 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
113934154 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zca02000
]
113934154 (ABCA1)
Transporters [BR:
zca02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113934154 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
113934154
NCBI-ProteinID:
XP_035579459
EnsemblRapid:
ENSZCAG00025014884
UniProt:
A0A6P9F0Y6
LinkDB
All DBs
Position
13:27484766..27610820
Genome browser
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SMKDIHQVLRTLQQIEHSSSGLKLQDFLVDNETFSGFLTYNLSLPRLTVDRMLGANVSLH
KVFLQGYQLHLTNLCSGSKLQEVIQLGEPEVSTLCSLPREKLDAAEQVLRSNMDILKPIL
RELNSTSPFLNKELVKATETLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDADSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDVQGMWEELS
PKIWTFMESNPEMDLVRTLLDSRSNDHFWEQQLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLISKSMELLDERKFWAGIVFTG
ITPDSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTISVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESEEKSHPGSSQKGVSEICVEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDVLTVEEHIWFYARLKGLSEKHVKAELEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVPELPPAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLHPFTEDDAIDPNDSDVDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDVGTQELLNALTRHPGFGTRCMEGNPIPDMPCSVGEEEWTT
APIPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQV
KKHLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRASL
QKGENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVDAKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SDIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggcctcagttgaggttgctgctatggaagaacctcactttcagaagaaga
caaacatgtcagctattgctggaagtggcctggcctctgtttatcttcctgatcctgatc
tctgtccggctgagctacccaccctatgaacaacatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttacccgactcctggtgaggcccctggggttgttggaaactttaacaaatcc
atcgtgtctcgcctgttctcagatgctcggcggcttcttctgtacagccagaaagatacc
agcatgaaggacatacaccaagttctgaggacgttgcagcagatagagcattccagttca
ggcttgaagcttcaggatttcctagtggacaatgaaaccttctctggattcctgacttac
aacctttctctgccaaggcttactgtggacagaatgctgggagccaatgtcagtctccac
aaggtatttttgcaaggctaccagttacatttgaccaatctgtgcagtggatccaaatta
caggaggtgattcaacttggtgaaccagaagtttccacgctttgcagcttgccaagggag
aaactggatgctgctgagcaagtccttcgttccaacatggacatcctgaagccgatcctg
agggaactaaactctacatctcccttcctgaataaggaactggttaaagctacagaaact
ttgctggatagtctcgggactttggcccaagagctgttcagcatgaacagctggagcgac
atgcggcaggaggtcatgttcctgaccaatgtgaacagctccagctcgtccacccagata
taccaagctgtgtcccgcatcgtctgtggccatcccgagggcgggggcctgaagatcaag
tccctcaactggtacgaggacaacaactacaaagctctctttggcggcaacggcacggat
gaagatgctgacagcttttatgacaattctacaactccttattgcaatgatctgatgaag
aatttggagtccagtcctctttcccgcatcatatggaaagctctcaagcctctgcttgtt
gggaagatcctgtatacacctgacactccagccacaagacaggttatggccgaggtgaat
aagacctttcaggaactggccgtgtttcatgatgtgcaaggcatgtgggaagagctcagc
cccaagatctggaccttcatggagagtaacccggaaatggaccttgttcggacactgttg
gacagcagaagcaatgaccacttttgggaacagcagttggatggcttagactggactgcc
aaagatatcctggcatttctggccaagcacccagaggacgtccagtctgctaacggctct
gtgtacacctggagagaagctttcaatgagactgaccaggcaatccagaccatctctcgc
ttcatggagtgtgtcaacctgaataagctcgaaccggtagcaacagaagtccggctcatc
agcaagtccatggagctgctggacgagcggaagttctgggccggtatcgtgttcaccgga
atcactcctgacagtgtggagttgccccgtcacgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggaccccggtcctcgggct
gacccctttgaggatatgcggtacgtctgggggggctttgcctacttacaagatgtggtg
gaacaggcgatcatcagggtgctgacgggcaccgagaagaaaactggtgtctatgtgcag
cagatgccctacccctgttatgtcgatgacatcttcctgcgggtgatgagccggtccatg
cccctgttcatgacgctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggcatc
ctgtggttcagctggttcatcagtagcctcattcctctgcttgtgagcgccggcctgctt
gtggtgattctgaaattaggaaacctgctgccctacagtgaccccagcgtggtgtttgtc
tttctgtccgtgttcgccgtggtgaccatcctgcagtgtttcctgatcagcacactcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcattctctacctgccc
tacgtgctgtgtgtggcatggcaagactatgtgggcttcacgctcaagatcttcgtgagc
ctgctgtctcctgtggcttttgggtttggctgtgagtactttgccctttttgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccccatggaggaagatggcttcaac
ctcaccatttcagtctccatgatgctgttcgacaccttcctctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatccccaggccctggtattttccttgc
accaaatcctactggttcggtgaggaaagtgaggagaagagccaccctggttccagccag
aagggagtatcagaaatctgcgtggaggaggagcccacacacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgtcgatggcctggcc
ttgaatttctatgagggccagatcacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaatcctgactgggttgttccctcccacctcgggcactgcctacattctg
ggaaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgcccccag
cataacgtgctgtttgacgtgctgactgtggaagaacacatctggttctatgcacggctg
aaggggctctcggagaagcacgtgaaggcagagctggagcagatggccttggatgttggt
ttgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggacgagcccaca
gccggcgtggacccttactcccgcaggggaatatgggagctcctgctgaaatatcgacaa
ggccgcaccattattctctccacacaccacatggatgaggcagacatcttgggggacagg
attgccatcatctcccatgggaagctgtgctgtgtgggctcctccctgtttctgaagaac
cagctgggaacaggctactacctgaccctggttaagaaggatgtggaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcatacctgaaaaaggtggtgcctgagcttccc
ccagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctcagccatctccaacctcatcaggaagcatgtggctgaagcccggctggtggaa
gacattgggcatgaactgacttatgtgctgccctacgaagctgccaaagagggggccttt
gtggaactcttccatgagattgatgaccggctctcagacctgggcatctctagttacggc
atctcagagacgaccctggaagaaatatttctcaaagtggctgaagagagtggggtggac
gctgagacctcagatggaaccttgccagcaagacgaaatagacgggccttcggggacaag
cagagctgccttcacccgttcactgaagatgatgctattgatcctaatgattctgatgta
gacccagaatccagagaaacagacctgctcagcgggatggacggcaaaggctcttaccag
gtgaagggctggaagctcacacaacagcagtttgtggcccttctgtggaagaggctgctg
attgccagacggagtcggaagggattctttgctcagatcgtcctaccagctgtgtttgtc
tgcattgccctggtgttcagcttgatcgtgcccccctttggcaagtaccccagcctggaa
cttcagccctggatgtacaacgaacagtacacgtttgtcagtaatgacgctcctgaggac
gtgggcacccaggaactcttgaatgccctcaccagacaccccggcttcgggacccgctgt
atggaaggaaatccaatcccagacatgccctgctcagtgggggaggaggagtggaccacc
gcccccattccccagaccatcacggacctgttccaaaatgggaactggacgatggagaac
ccctcacccacctgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtccc
ctgggggcaggggggctgcctcctccacaaagaaaacagaacactgcagacatccttcag
aacctgacgggaagaaacatttcggattatctggtcaagacctatgtgcagatcatagcc
aaaagtttaaagaacaagatctgggtgaatgagtttaggtatggagggttttccctgggt
gcaagtaattctcattcacttccttcaagtcaagaagttaataatgccatcaagcaagtg
aagaagcacttgaagctggccaaggacagttctgcagatcgatttctcagcagcttgggg
aggttcatgacaggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggc
tggcatgccatcagctctttcctgaacgtcatcaacaatgccattctgcgggcaagcctg
cagaagggagagaaccccagccagtatgggattactgccttcaatcaccccttgaatctc
accaagcagcagctctcggaagtggctctgatgaccacatcagtggatgtccttgtgtcc
atctgtgtcatctttgcgatgtccttcgtcccggccagctttgttgtgttcctgatccaa
gagcgggtcagcaaagcgaagcacctgcagttcatcagtggagtgaagcctgtcatctac
tggctttccaatttcgtgtgggatatgtgcaactatgtggtccctgccacgctggtcatt
atcatcttcatctgcttccagcagaagtcctatgtgtcctctaccaacctgcccgtgcta
gctcttctacttctgttgtacgggtggtcgatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcaccgcctacgtggtcctcaccagcgtgaacctcttcatcggg
atcaacggcagtgtggccactttcgtgctggagctctttaccaacaataagctgaataac
atcaatgatatcctgaagtctgtattcttgatcttcccacatttttgcctgggacggggg
ctcattgacatggtgaaaaaccaggcaatggctgatgccttggaaaggtttggggagaac
cgttttgtttcgccactgtcctgggacttagtgggacgaaacctctttgccatggccgtg
gaaggggtggtattcttcctcatcactgttctcatccagtacagattcttcatcaggccc
agacctgtagatgcaaagcttcctcctttgaatgatgaggatgaagatgtgaagcgggaa
agacagagaattcttgatggtggaggacagaatgacatcttggaaatcaaggagctgact
aagatatatagaagaaagaggaagcctgctgttgacaggatttgcgttggcattccgcct
ggcgagtgctttggacttctgggagttaacggggctgggaaatcatcaactttcaagatg
ttaactggagataccactgttaccagaggagatgctttcctgaacaaaaatagtatctta
tcagacatccatgaagtccatcagaacatgggctactgccctcagttcgatgccatcacg
gagttactgaccggaagagagcacgtggagttctttgccctcttgagaggagtcccagag
aaagaagttggcaaggttggtgaatgggcaattcggaaactgggccttgtaaagtatgga
gaaaaatatgctggtaactatagtggaggcaacaagcgcaagctctcaacggccatggct
ctgatcggcgggccccctgtcgtgtttctggatgaacctaccacaggcatggaccccaaa
gcccggcgattcttgtggaattgtgccctaagtattgtcaaggaaggcagatcagtagtg
cttacatctcatagtatggaagaatgtgaagctctctgcactaggatggcaattatggtc
aatgggaggttcaggtgtcttggcagcgtccaacatctgaaaaataggtttggagatggt
tacacaatagtggtacggatagcagggtccaaccctgacctgaagcctgtccaggagttc
tttggacttgcctttccaggaagtgtcctcaaagagaagcaccggaacatgctacaatac
cagcttccatcttcactatcttctctggccaggatattcagtatcctttcccagagcaaa
aagagactccacatagaagactactctgtttctcagacaacacttgaccaagtatttgta
aactttgccaaggaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaac
cagacagtagttgatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaa
agttacgtatga
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integrated database retrieval system
