Zalophus californianus (California sea lion): 113934741
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Entry
113934741 CDS
T07874
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
zca
Zalophus californianus (California sea lion)
Pathway
zca03320
PPAR signaling pathway
zca04148
Efferocytosis
zca04151
PI3K-Akt signaling pathway
zca04659
Th17 cell differentiation
zca04919
Thyroid hormone signaling pathway
zca04920
Adipocytokine signaling pathway
zca04928
Parathyroid hormone synthesis, secretion and action
zca04932
Non-alcoholic fatty liver disease
zca04976
Bile secretion
zca05160
Hepatitis C
zca05200
Pathways in cancer
zca05202
Transcriptional misregulation in cancer
zca05207
Chemical carcinogenesis - receptor activation
zca05216
Thyroid cancer
zca05222
Small cell lung cancer
zca05223
Non-small cell lung cancer
zca05226
Gastric cancer
zca05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
zca00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
113934741 (RXRA)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113934741 (RXRA)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
113934741 (RXRA)
09152 Endocrine system
04920 Adipocytokine signaling pathway
113934741 (RXRA)
03320 PPAR signaling pathway
113934741 (RXRA)
04919 Thyroid hormone signaling pathway
113934741 (RXRA)
04928 Parathyroid hormone synthesis, secretion and action
113934741 (RXRA)
09154 Digestive system
04976 Bile secretion
113934741 (RXRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
113934741 (RXRA)
05202 Transcriptional misregulation in cancer
113934741 (RXRA)
05207 Chemical carcinogenesis - receptor activation
113934741 (RXRA)
09162 Cancer: specific types
05226 Gastric cancer
113934741 (RXRA)
05216 Thyroid cancer
113934741 (RXRA)
05222 Small cell lung cancer
113934741 (RXRA)
05223 Non-small cell lung cancer
113934741 (RXRA)
09172 Infectious disease: viral
05160 Hepatitis C
113934741 (RXRA)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
113934741 (RXRA)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
113934741 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zca03000
]
113934741 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zca03310
]
113934741 (RXRA)
Transcription factors [BR:
zca03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
113934741 (RXRA)
Nuclear receptors [BR:
zca03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
113934741 (RXRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
113934741
NCBI-ProteinID:
XP_027472069
EnsemblRapid:
ENSZCAG00025016888
UniProt:
A0A6J2ET16
LinkDB
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Position
13:complement(2712370..2810623)
Genome browser
AA seq
470 aa
AA seq
DB search
MRIAHQCPVTPGDFSSQVNSSPLSSPTGRGSMAAPSLHPSLGPGIGSSLGSPGQLHSPIS
TLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTSSPQLSSPMNPVSSSEDIKPPLG
LNGVLKVPAHPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCR
DNKDCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPV
EKILEAELAVEPKTETYVDANMGLNPNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSEL
PLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTE
LVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQP
GRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaggattgcccatcagtgcccagtcacgcctggagacttctccagccaggtgaactcc
tcgcccctcagctcccccacggggcgtggctccatggccgccccctcactgcacccctct
ctggggcctggcatcggctcctcgctcggctcccctggacagctgcactcgcccatcagc
accctgagctcccccatcaatggcatgggcccacccttctcggtcatcagctcccccatg
ggcccccactccatgtccgtgcccaccacgccgaccctgggctttggcaccagcagcccc
cagctcagctcacccatgaaccccgtcagcagcagcgaggacatcaagcccccgctgggc
ctcaatggtgtcctcaaagtcccggctcacccgtcagggaacatggcgtccttcaccaag
cacatctgtgccatctgcggggaccgctcctcaggcaagcactacggggtgtacagctgc
gagggctgcaagggcttcttcaagcgcacggtgcgcaaggacctgacctacacctgccga
gacaacaaagactgcctgatcgacaagcgccagcgcaaccgctgccagtactgccgctac
cagaagtgcctggccatgggcatgaagcgggaagccgtacaggaggagcggcagcggggc
aaggacaggaacgagaacgaggtggagtccacgagcagtgccaacgaggacatgccagtg
gagaagattctggaggcagagctggctgtcgagcccaagaccgagacgtacgtggacgcg
aacatggggctgaaccccaactcgcccaacgaccccgtcaccaacatctgccaggcagcg
gacaaacagctcttcacgctggtcgagtgggccaagcggatcccgcatttctctgagctg
cccctggacgaccaggtcatcctgctgagggcaggctggaacgagctgctcatcgcctcc
ttctcccaccggtccatcgccgtgaaggacgggattctcctggccaccgggctgcacgtc
caccggaacagtgcccacagcgcaggggtgggcgccatcttcgacagggtgttgacggag
ctcgtgtccaagatgcgggacatgcagatggacaagacggagctgggctgcctgcgtgcc
attgtcctcttcaaccctgactccaaggggctctcgaacccagcggaggtggaggcgctg
cgggagaaggtctacgcgtccctggaggcctactgcaaacacaagtaccccgagcagcca
ggaaggttcgccaagctgctgctccgcctgccggctctgcgctccatcggcctcaagtgc
ctggaacatctcttcttcttcaagctcatcggggacacgcccatcgacaccttcctcatg
gagatgctagaagccccccaccaaatgacttag
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