Ziziphus jujuba (Chinese jujube): 107417117
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Entry
107417117 CDS
T04794
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107417117
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zju01009
]
107417117
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107417117
03036 Chromosome and associated proteins [BR:
zju03036
]
107417117
Protein phosphatases and associated proteins [BR:
zju01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107417117
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107417117
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107417117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
107417117
NCBI-ProteinID:
XP_015881167
UniProt:
A0A6P3ZZX5
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Position
4:join(23123942..23125189,23126277..23126666)
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AA seq
545 aa
AA seq
DB search
MIKQILGKIPRKPSKSSHGDSYSDGGATVHSSAKSSYGTNSINSSKPTPASSKSSTTRSS
NGTLAPHSSTVNKSNQAKKSAPVATTQVGPPLLAPTVYEALPSFHDVPSAEKQNLFLKKL
NMCCVVFDFSDPLKNLKEKDIKRQTLFELVDYILSVNSKFNEVTMQEITKMVAANLFRTF
PSPCHENKVLEMYDLEEEEPTMEPAWPHLQIVYEFLLRFVASPEIDAKLAKRYVDHSFVL
RLLDLFDSEDQRERDYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELL
EILGSIINGFAVPLKEEHKLFLVRALIPLHKPKCVSLYHQQLSYCITQFVEKDVKLADTV
IRGLLKYWPVTNSSKEVMFLSELEEVLEATQAAEFQRCMVPLFRQIARCLNSSHFQVSER
ALFLWNNDHIRNLITQNRQVILPVVFPALERNIQGHWNQAVQSLTLNVRKIFSDADQALF
DECLVRFQEDEIKEKERQEKLKLAWKRLEDVAASNAVSNEAVLVSKYASSVAIATSTKLR
ATPGS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaatactgggtaagattcctcggaaaccgtcaaaatcatcgcatggtgat
tcgtatagtgatggaggggcaactgtacattcgtctgcaaaatcctcttatggaaccaat
tcaattaacagctcaaaacccacgccagcttcttcaaaatcttcaaccacacgctcaagt
aatgggactcttgcaccgcactcatcaactgtgaataaatcgaatcaagccaagaaatct
gctccagtggcaacaacccaagtggggcctcctttgttggctccaacggtatatgaagct
ttgccgagtttccatgatgtcccaagtgcagagaagcagaatctgttccttaagaaattg
aatatgtgctgtgttgtctttgatttcagtgaccccttgaagaatcttaaagagaaggat
attaagcggcaaactttgtttgagcttgttgattatatcttgtctgtaaattccaagttc
aatgaggtgacgatgcaagagattacaaagatggtcgcagccaatctgtttcgaacattc
ccatctccctgtcatgagaataaggtccttgaaatgtatgaccttgaagaggaggagcca
actatggaacctgcttggcctcatcttcagatcgtgtatgaattcctgttgagatttgtt
gcttcaccagagatagatgccaagctagcaaaaagatatgttgaccattcctttgtgttg
agattgctcgacttgttcgactctgaggaccaaagggagagggattacttaaagacaatc
ctccaccgcatctatggcaagttcatggtgcatcgtcccttcattaggaaagccatcaac
aatatcttctatcgcttcatttttgagactgagaagcacaatgggattgcagagttgctt
gagatattgggaagcataattaatgggtttgctgtacctttgaaggaagagcacaagctg
ttccttgtccgtgcattgataccccttcacaaaccaaaatgcgtttctttgtaccatcag
cagctttcatattgcattactcagtttgtggagaaagatgtcaagctggctgatactgta
attcgaggtcttttaaagtattggcctgtaactaatagttcaaaggaggttatgttcctt
tctgagttggaagaagttctggaagccacccaggcggcagaatttcagcggtgcatggta
cctttatttcgtcaaatcgcccgctgcctcaacagctcacattttcaggtatcagaacgt
gcattgtttttgtggaacaatgaccatataagaaatttaataacacagaaccgtcaagtg
attcttcctgtagttttcccagcattggagagaaacatacagggtcattggaatcaagct
gttcagagtttgacgttgaatgtgagaaagattttctctgatgctgatcaagcacttttt
gatgaatgtttggtcagatttcaagaagatgaaatcaaggagaaggaaagacaggaaaag
ctgaaattggcttggaagcgcttggaagacgtggctgcctctaatgctgtaagcaatgag
gctgttcttgtttcaaagtatgcctcttctgttgccattgctaccagcacaaagttgcgt
gctactcctggcagttga
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