Ziziphus jujuba (Chinese jujube): 107420278
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Entry
107420278 CDS
T04794
Name
(RefSeq) tRNA wybutosine-synthesizing protein 2/3/4
KO
K15450
tRNA wybutosine-synthesizing protein 3 [EC:
2.1.1.282
]
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zju03016
]
107420278
Enzymes [BR:
zju01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.282 tRNAPhe 7-[(3-amino-3-carboxypropyl)-4-demethylwyosine37-N4]-methyltransferase
107420278
Transfer RNA biogenesis [BR:
zju03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107420278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TYW3
Met_10
Kelch_3
Kelch_1
Kelch_4
Kelch_5
Kelch_2
Kelch_6
MTS
DNA_methylase
Methyltransf_15
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
107420278
NCBI-ProteinID:
XP_048317963
LinkDB
All DBs
Position
1:join(15879158..15879941,15880251..15880650,15880970..15882160,15882396..15882525,15883118..15883353,15883868..15884003,15884424..15884500,15885142..15885248,15885333..15885439)
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AA seq
1055 aa
AA seq
DB search
MEFEKRKAATLASLGCTETDKSPKGTLDTPIIPLLDAINSHPCYFTTSSCSGRISILSQP
SPTATSKPKKKASGGSWLFITHDPADPDSVLDLLFPSSHSTQCHPPSQLVFRFEPLIVAV
ECKDLASAQSLVSIAIASGFRESGITSANKRVIIAIRCSIRLELPLGDTQKIMVSPEYVR
YLVEIANEKMEANRKRTEGFLRALRSNGFVGSSVDDGSSVKGSVEDNKSASVCGGGGGGV
ACNGDQDREPELQGRVRDAHSGSIGVHSSSLSIVPMVIVGEPVESLFIWGHSACTLGSTN
HNKVLVFGGFGGMGRHGRRNNSLLLDPFFGTLKAFGVEGGPTPRLGHTSSLVGDSMFVIG
GRADPEKILSDVWVLNIAKKEWKLLECSGDAFPPRHRHAAAVVGPNIYVFGGLNNDTISS
SFHVLNTDNLQWQELLVSGKQPCPRHSHSVVAFGSQLFLFGGYSGEKALGDLYSFNLKTY
QWKKETTAGKSPHARFSHSMFVYKNYLGVIGGCPVRQHFEELSILDLHYLTWRHVKLNSV
GKDLFVRSTANVVGDDLVMVGGGASCYAFGTKFSEPMIINLLPLQSLDDNLKPAEIQREH
VTHKSNGKSREKDEELQDPQTENMQTLTEAHGLNFEMVLPVASDGNEQLASYWVLQLERK
HAKMGKDILKKFQWLDLERKVYSSEDGTYICFPVNEKFCELFCEKQHSLRYGVEGQDNNI
VESVEKGSFFNEVDCLKALNILKEHGATKQRDEVVEVRKTAKSPLKIMNEAVAFLINNNG
LPVSLLEELPTRWERLGDIIVLPVSSFKSHLWDSIGKELWPTIAKSLNTHRLARQGQVAP
TGTRDSSLEILVGDSGWVDHRENGIIYSFDATKCMFSWGNLSEKLRMARLDCRNEVIVDL
FAGIGYFVLPFLVRAKAKLVYACEWNPHALEALHRNLQSNSVIDRCIILEGDNKITAPKG
VADRVCLGLLPTSEGSWVTAVRALRSEGGILHIHGNVKDSEEGLWTEHVLNSIHEIANNE
GYCWEIKIEHLERVKWYAPHIRHVVADVRCIQTQR
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaaaaggaaagcggcgacgttagcgtcactggggtgtacagagacagac
aaatcaccgaagggcacgttggacaccccaatcataccccttctcgacgcaatcaatagc
cacccttgttacttcactaccagttcctgctctggccgtatctctatcctttcccaaccg
tcacccaccgcaacctcgaagccaaagaagaaagcctcaggcggctcatggctcttcatc
actcacgaccccgccgatcccgactcggtgctagaccttctttttccttcttcccactca
actcaatgtcatcctccatcccagcttgttttcagattcgagcccttgatagtcgccgtc
gagtgcaaagacctcgcttcggctcagtctttggtttccattgctatagcttctgggttc
agagagtcgggcattaccagtgctaacaagcgggttattattgcaattcggtgttcgata
cgtttagagctgccacttggtgatacccagaagattatggtgtctcccgagtacgttcgg
taccttgttgaaatcgctaatgagaaaatggaagccaataggaagagaaccgaagggttt
cttcgggcattgcgaagtaatggttttgtggggtcgagtgttgatgatggaagctccgtg
aaaggttcagtggaggataataagagtgcttcagtgtgtggtggcggcggtggcggtgtt
gcttgtaatggtgatcaagatagggagcccgaattgcaaggaagagttcgggatgctcat
tctgggtcaataggagttcacagttccagtttgtctattgttccgatggtgattgttggt
gaacctgttgagagccttttcatttggggtcactcagcttgtacgttgggcagcacaaac
cataataaagttcttgtgtttggtggctttggaggcatgggacgacatggacgaagaaac
aattctttgctgctcgatccattctttggcacattgaaagcatttggtgtagagggtggc
ccgactccgcgcttaggccatacatcttctttggttggggattctatgtttgttattggt
ggtagggccgaccctgagaaaattctgagcgatgtgtgggtcctcaatatagccaagaaa
gaatggaagctcttagaatgctctggggacgcttttcctcccaggcatcggcacgctgca
gcagttgttggcccaaacatatatgtctttggtgggcttaacaatgacaccatctcttca
tctttccacgttctcaacacagataatttgcagtggcaagagttattggttagtgggaag
cagccttgtcctcggcattcacactctgttgtggcatttggatctcagctattccttttt
ggaggatatagtggtgaaaaagcacttggagacttgtacagttttaatttaaaaacatat
caatggaagaaagaaactacagcaggaaaaagcccacatgcaaggttctcgcactcaatg
tttgtttacaaaaattatcttggtgttattggtggctgtccggttagacaacattttgag
gagttgagtatactggatttgcattaccttacatggaggcatgtgaaactaaattctgtt
ggcaaagatttgtttgttcgtagcacagccaatgttgttggtgatgatcttgtgatggtt
gggggtggtgcgtcctgttatgcctttggaacgaagtttagtgagccaatgataattaac
ttgcttcccctgcaatctttggatgataatcttaaaccagctgaaattcaaagagagcat
gttactcacaaaagtaacgggaaaagtagagaaaaagatgaagagcttcaagatccacaa
actgaaaacatgcaaaccttaactgaagctcatggcctaaattttgagatggtattacct
gttgcaagtgacggaaatgagcagcttgcttcatattgggttctgcaacttgaaagaaaa
catgctaaaatgggaaaggatatattgaagaagtttcaatggttagatctcgaaaggaag
gtctactctagtgaagatggaacatatatttgttttccggtaaatgagaaattctgtgaa
ttgttttgtgaaaagcagcattctttgagatatggagttgaaggacaagataataatata
gttgaatcagttgaaaaaggatctttttttaatgaggtcgactgtttgaaagccttgaac
attctgaaggaacatggtgctaccaagcagagagatgaggttgttgaagtaagaaaaact
gccaaatctcccttgaagataatgaatgaagctgtagcctttctaataaataataacggt
ctacctgtcagccttttagaggagctacccacaagatgggagcgacttggggatattatt
gtgcttccagtatcatcttttaaaagtcatttatgggactcaattggaaaggagctctgg
cctactattgcgaaatcacttaacactcaccgtcttgctagacagggccaggttgcgcca
acaggtacaagggatagtagtttggagattcttgtgggggatagtggctgggttgatcat
cgagaaaatggaattatctattcttttgatgctaccaagtgcatgttctcctggggcaac
ctatctgagaagctccgaatggcccgtctagactgtcgaaatgaggttattgtggatttg
tttgctggaattggatattttgtgctgccttttctcgtcagggccaaggcaaaactagtt
tatgcttgtgaatggaacccccatgctcttgaggcactacatcgtaatctgcagtctaat
tcagttattgatcgttgtatcatacttgagggagacaacaagatcacagcaccgaaggga
gtggctgatcgagtttgtcttggtcttcttccaacaagtgagggtagctgggttactgct
gttagagcattaaggagtgaaggtgggatactacatatacatgggaatgtgaaggattcg
gaagagggtttgtggactgaacatgtcttaaactcaatacatgagattgctaacaacgaa
ggttattgctgggaaattaaaatagagcatttggagagagtgaaatggtatgctccacac
atccgtcatgttgtagctgatgtaagatgtatacagacacagagatag
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integrated database retrieval system
