Ziziphus jujuba (Chinese jujube): 107428404
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Entry
107428404 CDS
T04794
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107428404
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zju01009
]
107428404
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107428404
03036 Chromosome and associated proteins [BR:
zju03036
]
107428404
Protein phosphatases and associated proteins [BR:
zju01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107428404
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107428404
Chromosome and associated proteins [BR:
zju03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107428404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Lipase_GDSL
Motif
Other DBs
NCBI-GeneID:
107428404
NCBI-ProteinID:
XP_048318505
LinkDB
All DBs
Position
12:join(4411946..4413160,4414527..4414886)
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AA seq
524 aa
AA seq
DB search
MFKQILSKLPRKSAKSAENREYGGSHTTYSNASTSSRGNGLGHSKSGNSVASFPASNYAS
EVGLIHSNKNVRGANSKLNGTPISSYYEALPGFRDVPSSEKQNLFIKKLNMCCVVFDFND
PTKHLKEKEIKRQTLLELVDYVTSANGKFAETVMQEVINMVSANLFRSFTPQSRENKIVE
GFDFDEEEPAMDPAWSHLQIVYEFLLRFVASPETDAKLAKRYIDHSFILKLLDLFDTEDP
REREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFA
LPLKEEHKLFLVRALIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPIT
NSSKEVMFLGELEEILEATQPPEFQRCMVPLFRRIACCLNSSHFQVAERALFLWNSDHIE
NLIKQNRDVILPIIFPALEKNARSHWNQAVHGLTLNVRKMFCDIDPELFKECLTAFEENE
SKKDEIKARREATWKRLEEIAANKAASNEAVLVSVKSPPLKASI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacagatactaagcaagctcccccggaagtcagccaagagtgctgaaaatcga
gaatatggtggaagccacacaacttattcaaatgcttctacaagttcaagaggcaatggt
ttagggcatagcaagtctggaaattcagttgcatctttcccagcctctaattacgcttcg
gaagtgggactaattcacagtaacaaaaatgtgcgaggtgcaaactcaaagctgaatggg
acaccaatctcttcttattatgaagcattgcccggatttagggatgtaccgagctctgag
aagcagaatttgttcataaaaaagctgaacatgtgctgtgtcgtctttgacttcaatgac
ccaacaaagcacctcaaagaaaaggagatcaagcgacagacattgctagagctagtggat
tatgtgacttctgcaaatggtaaatttgcagaaactgttatgcaagaggttataaatatg
gtatcggctaatttgtttaggtcgttcactccacaatcacgtgagaataaaattgtagaa
ggatttgatttcgatgaggaggagcctgcaatggatcctgcatggtcccacttgcaaatt
gtttatgagtttctcttaaggtttgttgcatcacctgagacggatgctaaattggctaaa
agatacattgatcactcgttcattctcaagttgttggatctctttgacactgaagatcct
agagaaagggaatacctgaaaaccatcctgcacagaatatatgggaagtttatggtacat
cgtccattcatcaggaaagctatcaacaatatcttttatcgtttcatctttgagactgag
aagcataatgggattgctgaacttttagaaattttgggcagtatcataaatgggtttgct
ttgcctttgaaagaagaacataaattgtttcttgttcgagcgcttatacccttgcacaaa
ccgaaatgcttggctatgtaccatcagcagttatcttactgcattacacaatttgtggag
aaagattgtaagcttgctgatacagtcataaggggtttattgaagtactggccaatcact
aatagttcaaaggaagtaatgttcttaggtgagttggaggaaattttagaagcaactcag
ccacctgaattccagcgctgcatggtacccctctttcgccgaattgcttgctgcttgaac
agttcacactttcaggtggcagagagagctttgtttttatggaacagtgatcacattgag
aacttgatcaaacaaaatcgcgatgtcatactgcccattatcttccctgcattggagaaa
aatgctagaagtcattggaatcaagctgtccatggcttgaccttaaatgtacgcaaaatg
ttctgtgatatcgatcctgagctattcaaagaatgcttaactgcgttcgaggaaaatgag
tcgaagaaagacgagattaaagcaagaagggaagccacgtggaaacgcttagaagaaatt
gctgcaaacaaagctgcaagcaatgaagctgtgcttgtttctgtcaaatcacctccgctt
aaggcttcaatttag
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