Ziziphus jujuba (Chinese jujube): 107431257
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Entry
107431257 CDS
T04794
Name
(RefSeq) protein SCAR2 isoform X1
Organism
zju
Ziziphus jujuba (Chinese jujube)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2498
Motif
Other DBs
NCBI-GeneID:
107431257
NCBI-ProteinID:
XP_048319636
LinkDB
All DBs
Position
6:join(10146336..10146490,10147541..10147704,10147837..10147960,10148038..10148167,10148955..10149013,10149128..10153040,10153140..10153226,10153335..10153439,10153550..10153600)
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AA seq
1595 aa
AA seq
DB search
MPLTRYQIRNEYGLADPELYAAADKDDPEALLEGVAMAGLVGVLRQLGDLAEFAAEIFHD
LHEEVMVTAARGHGLVVRVQQLEAEFPSIEKALLSQTNHSSFFTNAGVDWHPNLRSEQNL
VTRGDLPRFVMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSFFKVEAASSGMATVE
YQREKKTRKAKKKGSRWRNGETPEVIPASTKLHQLFLEERIENGYSDPARLVKLKRRQLN
GSAIDSKGRKSYMEKFVETPSPEHKMVCETSVSPSLLKLTSENTSESGLRILEIGTVSSA
EKSPLKESACSSPNDHEVVLKALMNGFNEGVASREIVKVPEPPLNDETVDIPSTVHDEAV
EQLLSVNEEDKTEGSVNGYASDDVTSEVDNYMDALATMESEIETDNEYKPKNNLHLFNTQ
KHGTDFDANEENSELQAQLSDSQSVGNFSMSDDGNNSFKKNRSSFSCSDTPSSLVENTPS
DCDGVSKVVPSTATGAEIADVPSNQLSVIDESLVTTSNELVVSHDTRIQGVHCSDVEDAS
SSVLLEDLNSIPVQLDPGTSLSTAPLMGSKIDEMPTEHIMLGSTLPSTDEKGVIHVDLPS
VIPDVSSATNYDYTNTSESFPQNEDGDPNVTSDALPHFSNISELAFENTSRDNSMNGLFH
TQHEDEDSKQNLPSASEEEKQFCSSALAEEACSANLLLTDSLPASSSYYSDVVESDNLIS
KVDDAVTAAVVNYEVLPPMVDSAQSTGSEETPSAMDSSQTQSLMGQQFSDSGENVHNVPV
TAEMGVTYSKEKSYTEESSRVVDSEEICLSTSYMDAVDENPVSLGLLSNLPDYPGSDGHI
NSDDVVPEPVNGVDLSMPSVVVDDAVGDVNNVSCMSRDAVCSPSRDLTDLRESPLGSEDH
LEKEVEFDEAVCSPSGDLTDLREYPLGSEDHLEKEVEFDEAVCSPSRDLTDLRESPFGSE
DHLEKEVEFEEAVSPKYLMESEAQKQLGQLDVAPTNLDSNTCMSVPYDRSSSKIVNDVHD
LSQNSLPVGDIGAVSTPLEMKDEESESKSPSQSNMLDYMEDAELLPTCNLPESNTVLEKS
LKSQADQADVECLQSDDAMLHPETPSEESQLQSDQPDVKCLVDQVNSNSSVLSSEEVESL
DLMDKEKCEHRESRISLHQDLNVSSESLQEKFPSQPSTSEFLPESVGQEVDNTKQAFNSS
ESVFPSFGLLHEPAQVDLGEMPPLPPLPPMQWRMGKSQHTSLMPQRLSVEPYHDLFSPIQ
PSKANERAQFEVPASQSGLQQPENLFLPLTIVENKKSVDISEPLASNLMLPTTYSLQLPE
MVHDANGQFSHLAYGGTQSLNPFLTLPVTSNEKPGHSYLAFEGDMVQSGSNPFLPGPTTE
YKTPTHDHVISEEAIQPPKQLALETTIDNKVNEQPLDSSGEQGTKHSSEEQGTKHSSEEQ
GTRFITSVQTSTLTDEQYQLSLPMTKGETAWSSGISTMALVTDFENGQANGSPTNKLPRP
RNPLIDAVNAHGKSKLRKVTERVRPQIGPKLDERDSLLEQIRTKSFNLKPAATTRPSIQG
PKTNLKVAAILEKANAIRQALAPSDEDDDDNWSDS
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgacgaggtatcagataaggaatgagtacggtttggcggatccggagctgtat
gcagctgcggataaagatgatcccgaggctctcttggaaggagtggctatggctggtctt
gttggtgtattgcgccagctaggtgacctcgctgagtttgcggctgaaatattccatgac
ttgcatgaagaagtaatggtgactgctgcaagaggccacggtctagtggttcgtgtccaa
cagcttgaagcagagttcccttcaattgagaaggcacttctatcccaaactaatcattca
tcctttttcaccaatgcaggtgttgattggcatcctaatttgcgttccgaacaaaatttg
gttactcgtggagatttacctcgctttgtgatggattcttatgaagagtgcaggggtcca
ccacggttattccttttggacaagtttgatgttgctggggctggggcatgtttaaagcgt
tatactgatccttcgttctttaaagtggaagcagcatcctctggaatggcaacagttgag
tatcaaagggaaaaaaagacccgtaaagcaaagaagaaaggatcgcgctggaggaatgga
gaaacaccagaagtcataccagcatctacaaaattgcatcagttgtttttggaagagcgt
attgagaatggttatagtgatcctgcacgtcttgtgaaattaaagagaaggcaattgaat
ggatctgcaattgattcaaaaggtcggaaaagttacatggaaaagtttgtggagacgcct
tcaccagagcataaaatggtttgtgaaacatctgtttcaccatcactcttgaagttaacg
tctgagaatacaagtgaatcagggcttagaatacttgaaattggtacagtgagttctgct
gaaaagtcaccactaaaagaaagtgcttgttcatcacctaatgaccatgaagttgtatta
aaggccctgatgaatggttttaatgaaggggtggccagcagagaaattgtcaaggtgcct
gagccaccccttaacgatgagacagttgacattccttccaccgttcatgatgaggcagtt
gagcaattattatccgttaatgaagaagacaaaactgaaggcagtgtaaatgggtatgct
tctgatgatgttaccagtgaggtagacaattacatggatgctctagctaccatggagtca
gaaatagaaacagacaatgagtataaacctaagaataatttgcatctttttaatactcaa
aaacatgggacagattttgatgcaaatgaagaaaattcagagctccaagctcaactttca
gattcacagtcagttggaaacttctctatgtcagatgatgggaataattcattcaagaaa
aacagatcaagtttttcatgctctgacactccaagcagcttggttgagaatacaccatca
gattgtgatggagtgtctaaagtagtcccttctactgcaactggagctgagattgcagat
gtgccatccaaccagctctctgtaattgatgagtctctggtgacaacttccaatgagctt
gtggtgtctcatgatacacggattcagggagtccattgctctgatgtggaagatgcatct
agtagtgtgctgcttgaggatttgaattcaataccagtacaattagatcctggaaccagc
ttgtcaacagctccattgatgggatccaaaatagatgaaatgcctactgaacatattatg
cttggttctactttacccagtacagatgaaaagggagtaatccatgttgatctgccatct
gttatccctgatgtttcctctgcaactaattatgattacacaaacacttctgaaagcttt
cctcagaatgaagatggagatccaaatgtcacttctgatgctttacctcatttttcgaac
atttcagagctggcttttgaaaacacaagtagagataattctatgaacggactttttcat
acacaacatgaggatgaagattcaaagcaaaatttaccaagtgcctcagaggaagaaaag
cagttctgttcctctgccttggcagaagaagcttgttctgcaaatttgctattgactgac
agtttgcctgcttctagttcttattattcagatgttgtggagagtgacaatttgatttcc
aaagtggatgatgctgttacagcagctgtagtcaactatgaagttttacctcccatggtg
gatagtgcacagagcactggctcagaagagactccttccgcaatggattcttcacagacc
caaagcttaatggggcaacaattctcagattcaggtgaaaatgttcataatgttcctgtc
acagcagaaatgggtgttacatattccaaggagaaatcatatacggaagagagttctagg
gtggtggacagtgaggaaatatgcctatctaccagctatatggatgcagtggacgaaaat
cctgtttctctgggactactgtctaaccttccagattaccctggcagtgatggccatata
aattcagatgatgtggtacccgaaccagttaatggagtagatctgtccatgccttctgtt
gttgttgatgatgctgtcggtgatgtcaacaatgttagctgcatgtctcgtgatgcagtt
tgttctccatcaagggatcttacggatttacgagaatctcctcttggctctgaggatcac
cttgagaaagaagtggaatttgatgaggcggtttgttctccatcaggggatcttactgat
ttacgagagtatcctcttggctctgaggatcaccttgagaaagaagtggaatttgatgag
gcggtttgttctccatcaagggatcttactgatttacgagaatctccttttggctctgag
gatcaccttgagaaagaagtggaatttgaagaggcggtttctccaaaatatcttatggaa
tcagaagcacaaaagcaattaggtcaactggatgttgctcccacaaatttggactcgaac
acatgtatgtcagtgccatatgacaggtccagttctaagatagttaatgatgtacatgat
ttatctcagaacagcttgcctgttggtgatattggtgcagtctcaacacctttggagatg
aaagatgaagagtctgaatcaaaatctccatctcaaagtaatatgttagattacatggaa
gatgctgagctgttacctacctgtaacctaccagagtcaaatactgttttagaaaagtct
ttaaagtcacaagctgatcaagctgatgtggaatgtctgcagtctgatgatgcaatgctt
catccagaaactccttcagaagaatctcagttacaatctgatcagcctgatgtgaaatgt
ctagtagatcaagtgaattctaactcatcagttctttcatctgaagaggttgaatcctta
gatctcatggataaggaaaaatgcgaacacagagaatctcgaataagcttacatcaagat
ttaaatgtttcttcggaatctcttcaagaaaaatttccaagtcagccttcaacatcagag
ttcttaccagagtcagtaggtcaggaagttgataatacaaaacaagcctttaattcatca
gagtcagtttttcctagctttggtttgctccatgaaccagctcaagttgatctgggggag
atgccaccgttgccacctctacctcctatgcaatggaggatgggaaagtctcaacatact
tccctcatgccgcaaagattatcggtggagccttatcatgacttgttttcaccgatacag
ccatcaaaagccaatgagagagctcaatttgaagtaccagcatcccagagtggtttacag
cagccagagaacctgtttttgcctctcacaattgtagaaaataagaaatccgtagatatt
tctgagcctttggcaagtaatctgatgctgccaaccacatattcattgcaattgccagaa
atggttcatgatgctaatggccaattcagtcaccttgcttatgggggaacacaatcccta
aacccattcttaacattaccagttacatctaatgagaagcctgggcatagttaccttgct
tttgagggagacatggtgcagtctggttcaaatcccttcttgccaggaccaaccactgag
tataaaactcctacacatgatcatgtaatttcagaagaagcaatccagcctccgaaacag
ttggcgctggaaacaactatagacaacaaggtgaatgagcaaccattagatagttcagga
gagcaagggacaaagcatagttcagaagagcaagggacaaagcatagttcagaagagcaa
gggacaaggtttatcacctctgtgcaaacttcaacattgacagatgagcagtatcagctc
agtttgccaatgacaaaaggagaaacagcatggtcctcaggtatttccactatggctctg
gtgacagactttgaaaacggacaggcaaatggaagtccaacgaacaagctccctcgtcct
aggaatccccttattgatgctgttaatgctcatggaaaaagcaagttgagaaaggtaact
gaacgagttcggcctcagattggaccaaagttagatgaaagagattcattgctagaacag
atacgaactaagtctttcaacttgaagcctgctgcgacaacgagacccagcattcagggt
cctaaaaccaacttgaaggttgctgccatcctggagaaagcaaatgcaattcgccaggca
ttagctcccagcgatgaagatgatgatgataattggagcgactcttga
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integrated database retrieval system
